Gene annotation
Transcriptome id Sobic.001G191300.1
Synonym Sb01g016820
Functional annotation bile acid sodium symporter family protein, putative, expressed
UniProt C5WVA9
Pfam PF01758
Panther DB PTHR10361 PTHR10361:SF28
NCBI CDD KOG2718; Na+-bile acid cotransporter
KEGG Orthology K03453; bile acid:Na+ symporter, BASS family
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G78560 : Sodium Bile acid symporter family
RAP-DB (Rice) LOC_Os04g31210.1 : bile acid sodium symporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006263
Brachypodium PNT68489
Barley HORVU1Hr1G085160.6 , HORVU1Hr1G085160.5 , HORVU1Hr1G085160.4 , HORVU1Hr1G085160.2 , HORVU1Hr1G085160.9 , HORVU1Hr1G085160.8 , HORVU1Hr1G085160.16 , HORVU1Hr1G085160.15 , HORVU1Hr1G085160.14 , HORVU1Hr1G085160.13 , HORVU1Hr1G085160.11 , HORVU1Hr1G085160.10
Wheat TraesCS1B02G413800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G077466 - -
2 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.004G305300 - -
5 Sobic.002G399000 expressed protein -
6 Sobic.003G362800 - -
7 Sobic.002G085600 - -
8 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
9 Sobic.002G110600 regulatory protein, putative, expressed -
10 Sobic.009G223900 protein binding protein, putative, expressed -
11 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
12 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
13 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
14 Sobic.004G350600 AMP-binding domain containing protein, expressed -
15 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
16 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G149600 transmembrane protein 18, putative, expressed -
18 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
19 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
20 Sobic.004G144300 - -


Gene co-expression network
sample Sobic001G191300 Sobic001G191300 Sobic007G077466 Sobic007G077466 Sobic001G191300--Sobic007G077466 Sobic003G118500 Sobic003G118500 Sobic001G191300--Sobic003G118500 Sobic001G350300 Sobic001G350300 Sobic001G191300--Sobic001G350300 Sobic004G305300 Sobic004G305300 Sobic001G191300--Sobic004G305300 Sobic002G399000 Sobic002G399000 Sobic001G191300--Sobic002G399000 Sobic003G362800 Sobic003G362800 Sobic001G191300--Sobic003G362800 Sobic002G085600 Sobic002G085600 Sobic001G191300--Sobic002G085600 Sobic002G001500 Sobic002G001500 Sobic001G191300--Sobic002G001500 Sobic002G110600 Sobic002G110600 Sobic001G191300--Sobic002G110600 Sobic007G077466--Sobic001G191300 Sobic007G077466--Sobic002G001500 Sobic001G503700 Sobic001G503700 Sobic007G077466--Sobic001G503700 Sobic007G077466--Sobic003G118500 Sobic007G077466--Sobic004G305300 Sobic007G077466--Sobic003G362800 Sobic007G077466--Sobic002G110600 Sobic010G000200 Sobic010G000200 Sobic007G077466--Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic007G077466--Sobic004G173200 Sobic003G118500--Sobic004G305300 Sobic001G104100 Sobic001G104100 Sobic003G118500--Sobic001G104100 Sobic003G118500--Sobic001G191300 Sobic004G310400 Sobic004G310400 Sobic003G118500--Sobic004G310400 Sobic003G118500--Sobic001G350300 Sobic004G026000 Sobic004G026000 Sobic003G118500--Sobic004G026000 Sobic001G096200 Sobic001G096200 Sobic003G118500--Sobic001G096200 Sobic003G118500--Sobic007G077466 Sobic003G118500--Sobic003G362800 Sobic006G170800 Sobic006G170800 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic004G350600 Sobic004G350600 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic002G320700 Sobic002G320700 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic004G305300--Sobic001G350300 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G305300--Sobic004G350600 Sobic004G305300--Sobic002G399000 Sobic004G305300--Sobic007G077466 Sobic002G399000--Sobic001G350300 Sobic002G399000--Sobic004G350600 Sobic002G399000--Sobic001G104100 Sobic002G399000--Sobic001G191300 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic002G399000--Sobic004G305300 Sobic002G399000--Sobic003G118500 Sobic005G025400 Sobic005G025400 Sobic002G399000--Sobic005G025400 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G155800 Sobic003G155800 Sobic003G362800--Sobic003G155800 Sobic004G181000 Sobic004G181000 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic008G103400 Sobic008G103400 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic009G192933 Sobic009G192933 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic002G085600--Sobic001G191300 Sobic002G085600--Sobic004G305300 Sobic009G223900 Sobic009G223900 Sobic002G085600--Sobic009G223900 Sobic002G085600--Sobic004G144300 Sobic002G398600 Sobic002G398600 Sobic002G085600--Sobic002G398600 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200 Sobic002G110600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G110600--Sobic008G016800 Sobic001G212900 Sobic001G212900 Sobic002G110600--Sobic001G212900 Sobic002G110600--Sobic003G362800 Sobic002G110600--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic002G110600--Sobic010G012200 Sobic001G109400 Sobic001G109400 Sobic002G110600--Sobic001G109400 Sobic004G315400 Sobic004G315400 Sobic002G110600--Sobic004G315400 Sobic002G110600--Sobic002G398600
Octagon: transcription factors


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