Gene annotation
Transcriptome id Sobic.008G016800.1
Synonym Sb08g001470
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt C5YQM8
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF94
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G56930 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os12g03730.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028965
Brachypodium KQJ92431
Barley HORVU5Hr1G044960.4 , HORVU5Hr1G044960.5 , HORVU5Hr1G044960.6 , HORVU5Hr1G044960.7 , HORVU5Hr1G044960.1 , HORVU5Hr1G044960.2 , HORVU5Hr1G044960.3 , HORVU5Hr1G044960.8 , HORVU5Hr1G044960.9 , HORVU5Hr1G044960.16 , HORVU5Hr1G044960.17 , HORVU5Hr1G044960.14 , HORVU5Hr1G044960.15 , HORVU5Hr1G044960.13 , HORVU5Hr1G044960.10 , HORVU5Hr1G044960.18 , HORVU5Hr1G044960.19 , HORVU5Hr1G044960.22 , HORVU5Hr1G044960.21
Wheat TraesCS5A02G139300 , TraesCS5D02G153000 , TraesCS5B02G136900
Populus -


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cDNA sequences
Sobic.008G016800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G110600 regulatory protein, putative, expressed -
2 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
4 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
5 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
6 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
7 Sobic.003G362800 - -
8 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
9 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
10 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
11 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G197400 expressed protein -
13 Sobic.009G223900 protein binding protein, putative, expressed -
14 Sobic.003G001650 - -
15 Sobic.010G042300 DTA2, putative, expressed -
16 Sobic.004G072201 - -
17 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
18 Sobic.002G085600 - -
19 Sobic.004G218400 - -
20 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -


Gene co-expression network
sample Sobic008G016800 Sobic008G016800 Sobic002G110600 Sobic002G110600 Sobic008G016800--Sobic002G110600 Sobic001G109400 Sobic001G109400 Sobic008G016800--Sobic001G109400 Sobic008G103400 Sobic008G103400 Sobic008G016800--Sobic008G103400 Sobic002G398600 Sobic002G398600 Sobic008G016800--Sobic002G398600 Sobic001G212900 Sobic001G212900 Sobic008G016800--Sobic001G212900 Sobic006G249600 Sobic006G249600 Sobic008G016800--Sobic006G249600 Sobic003G362800 Sobic003G362800 Sobic008G016800--Sobic003G362800 Sobic001G383200 Sobic001G383200 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300 Sobic002G110600--Sobic008G103400 Sobic002G110600--Sobic008G016800 Sobic002G110600--Sobic001G212900 Sobic002G110600--Sobic003G362800 Sobic004G173200 Sobic004G173200 Sobic002G110600--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic002G110600--Sobic010G012200 Sobic002G110600--Sobic001G109400 Sobic004G315400 Sobic004G315400 Sobic002G110600--Sobic004G315400 Sobic002G110600--Sobic002G398600 Sobic001G109400--Sobic001G212900 Sobic004G072201 Sobic004G072201 Sobic001G109400--Sobic004G072201 Sobic002G374000 Sobic002G374000 Sobic001G109400--Sobic002G374000 Sobic002G187900 Sobic002G187900 Sobic001G109400--Sobic002G187900 Sobic001G109400--Sobic001G383200 Sobic001G109400--Sobic006G249600 Sobic006G255200 Sobic006G255200 Sobic001G109400--Sobic006G255200 Sobic001G109400--Sobic004G315400 Sobic001G109400--Sobic008G016800 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic008G103400--Sobic004G315400 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic002G398600--Sobic008G192900 Sobic002G398600--Sobic001G212900 Sobic002G398600--Sobic008G103400 Sobic002G398600--Sobic008G016800 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic003G253700 Sobic003G253700 Sobic006G249600--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic003G362800--Sobic002G001500 Sobic001G113400 Sobic001G113400 Sobic003G362800--Sobic001G113400 Sobic003G155800 Sobic003G155800 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic001G383200--Sobic004G072201 Sobic001G383200--Sobic001G109400 Sobic001G383200--Sobic002G374000 Sobic002G309300 Sobic002G309300 Sobic001G383200--Sobic002G309300 Sobic001G383200--Sobic003G263900 Sobic001G383200--Sobic006G157450 Sobic001G038700 Sobic001G038700 Sobic001G383200--Sobic001G038700 Sobic001G383200--Sobic008G103400 Sobic001G383200--Sobic006G255200 Sobic007G077466 Sobic007G077466 Sobic001G191300--Sobic007G077466 Sobic003G118500 Sobic003G118500 Sobic001G191300--Sobic003G118500 Sobic001G350300 Sobic001G350300 Sobic001G191300--Sobic001G350300 Sobic004G305300 Sobic004G305300 Sobic001G191300--Sobic004G305300 Sobic002G399000 Sobic002G399000 Sobic001G191300--Sobic002G399000 Sobic001G191300--Sobic003G362800 Sobic002G085600 Sobic002G085600 Sobic001G191300--Sobic002G085600 Sobic001G191300--Sobic002G001500 Sobic001G191300--Sobic002G110600
Octagon: transcription factors


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