Gene annotation
Transcriptome id Sobic.008G103400.1
Synonym Sb08g015550
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5YNX4
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT2G03720 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os12g31710.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a054200
Brachypodium KQJ86648
Barley -
Wheat TraesCS5D02G120800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G110600 regulatory protein, putative, expressed -
2 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
4 Sobic.003G362800 - -
5 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
6 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
7 Sobic.009G223900 protein binding protein, putative, expressed -
8 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
9 Sobic.004G315400 cation efflux family protein, putative, expressed -
10 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
12 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
13 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
14 Sobic.010G000200 expressed protein -
15 Sobic.010G042300 DTA2, putative, expressed -
16 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
18 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
19 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
20 Sobic.001G090700 expressed protein -


Gene co-expression network
sample Sobic008G103400 Sobic008G103400 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic003G362800 Sobic003G362800 Sobic008G103400--Sobic003G362800 Sobic010G012200 Sobic010G012200 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic002G110600--Sobic008G103400 Sobic002G110600--Sobic008G016800 Sobic001G212900 Sobic001G212900 Sobic002G110600--Sobic001G212900 Sobic002G110600--Sobic003G362800 Sobic004G173200 Sobic004G173200 Sobic002G110600--Sobic004G173200 Sobic002G110600--Sobic010G012200 Sobic001G109400 Sobic001G109400 Sobic002G110600--Sobic001G109400 Sobic002G110600--Sobic004G315400 Sobic002G398600 Sobic002G398600 Sobic002G110600--Sobic002G398600 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic003G155800 Sobic003G155800 Sobic004G181000--Sobic003G155800 Sobic009G208000 Sobic009G208000 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic001G113400 Sobic001G113400 Sobic004G181000--Sobic001G113400 Sobic008G192900--Sobic008G103400 Sobic008G192900--Sobic002G398600 Sobic008G192900--Sobic004G173200 Sobic008G192900--Sobic010G012200 Sobic001G370800 Sobic001G370800 Sobic008G192900--Sobic001G370800 Sobic010G000200 Sobic010G000200 Sobic008G192900--Sobic010G000200 Sobic008G192900--Sobic003G362800 Sobic003G262600 Sobic003G262600 Sobic008G192900--Sobic003G262600 Sobic003G155000 Sobic003G155000 Sobic008G192900--Sobic003G155000 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic001G520000 Sobic001G520000 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic010G012200--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic010G012200--Sobic006G157450 Sobic010G012200--Sobic010G000200 Sobic010G012200--Sobic004G315400 Sobic010G012200--Sobic008G103400 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200 Sobic009G223900--Sobic002G001500 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic009G223900--Sobic003G262600 Sobic008G016800--Sobic002G110600 Sobic008G016800--Sobic001G109400 Sobic008G016800--Sobic008G103400 Sobic008G016800--Sobic002G398600 Sobic008G016800--Sobic001G212900 Sobic006G249600 Sobic006G249600 Sobic008G016800--Sobic006G249600 Sobic008G016800--Sobic003G362800 Sobic001G383200 Sobic001G383200 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300 Sobic002G374000 Sobic002G374000 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic004G315400--Sobic001G109400 Sobic004G315400--Sobic001G212900 Sobic004G315400--Sobic008G103400 Sobic001G483001 Sobic001G483001 Sobic004G315400--Sobic001G483001 Sobic004G072201 Sobic004G072201 Sobic004G315400--Sobic004G072201 Sobic005G031400 Sobic005G031400 Sobic004G315400--Sobic005G031400 Sobic004G315400--Sobic002G110600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.