Gene annotation
Transcriptome id Sobic.002G110600.2,Sobic.002G110600.1
Synonym Sb02g009460
Functional annotation regulatory protein, putative, expressed
UniProt A0A1B6QAH8 , A0A1B6QAL4
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF493
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os07g19444.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a005252 , Zm00025a045650
Brachypodium KQK20125
Barley HORVU2Hr1G005990.11 , HORVU2Hr1G005990.10 , HORVU2Hr1G005990.9 , HORVU2Hr1G005990.8 , HORVU2Hr1G005990.5 , HORVU2Hr1G005990.4 , HORVU2Hr1G005990.7 , HORVU2Hr1G005990.6 , HORVU2Hr1G005990.1 , HORVU2Hr1G005990.3 , HORVU2Hr1G005990.2 , HORVU3Hr1G094380.1
Wheat TraesCS4A02G339800 , TraesCS2D02G038300 , TraesCS2D02G038300 , TraesCS2B02G052600 , TraesCS2A02G039700 , TraesCS2A02G039700 , TraesCS2A02G051400 , TraesCS3D02G423700
Populus -


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cDNA sequences
Sobic.002G110600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
2 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
3 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
4 Sobic.003G362800 - -
5 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
6 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
7 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
8 Sobic.004G315400 cation efflux family protein, putative, expressed -
9 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
11 Sobic.010G000200 expressed protein -
12 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
13 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
15 Sobic.008G160100 - -
16 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
17 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
19 Sobic.002G197400 expressed protein -
20 Sobic.007G077466 - -


Gene co-expression network
sample Sobic002G110600 Sobic002G110600 Sobic008G103400 Sobic008G103400 Sobic002G110600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G110600--Sobic008G016800 Sobic001G212900 Sobic001G212900 Sobic002G110600--Sobic001G212900 Sobic003G362800 Sobic003G362800 Sobic002G110600--Sobic003G362800 Sobic004G173200 Sobic004G173200 Sobic002G110600--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic002G110600--Sobic010G012200 Sobic001G109400 Sobic001G109400 Sobic002G110600--Sobic001G109400 Sobic004G315400 Sobic004G315400 Sobic002G110600--Sobic004G315400 Sobic002G398600 Sobic002G398600 Sobic002G110600--Sobic002G398600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic008G103400--Sobic004G315400 Sobic008G016800--Sobic002G110600 Sobic008G016800--Sobic001G109400 Sobic008G016800--Sobic008G103400 Sobic008G016800--Sobic002G398600 Sobic008G016800--Sobic001G212900 Sobic006G249600 Sobic006G249600 Sobic008G016800--Sobic006G249600 Sobic008G016800--Sobic003G362800 Sobic001G383200 Sobic001G383200 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic002G187900 Sobic002G187900 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic003G362800--Sobic002G001500 Sobic001G113400 Sobic001G113400 Sobic003G362800--Sobic001G113400 Sobic003G155800 Sobic003G155800 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic004G173200--Sobic010G000200 Sobic003G262600 Sobic003G262600 Sobic004G173200--Sobic003G262600 Sobic004G173200--Sobic002G398600 Sobic001G370800 Sobic001G370800 Sobic004G173200--Sobic001G370800 Sobic004G173200--Sobic002G187900 Sobic004G173200--Sobic003G362800 Sobic004G173200--Sobic006G249600 Sobic004G173200--Sobic001G212900 Sobic004G173200--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic010G012200--Sobic001G520000 Sobic003G155000 Sobic003G155000 Sobic010G012200--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic010G012200--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic010G012200--Sobic006G157450 Sobic010G012200--Sobic010G000200 Sobic010G012200--Sobic004G315400 Sobic010G012200--Sobic008G103400 Sobic001G109400--Sobic001G212900 Sobic004G072201 Sobic004G072201 Sobic001G109400--Sobic004G072201 Sobic001G109400--Sobic002G374000 Sobic001G109400--Sobic002G187900 Sobic001G109400--Sobic001G383200 Sobic001G109400--Sobic006G249600 Sobic006G255200 Sobic006G255200 Sobic001G109400--Sobic006G255200 Sobic001G109400--Sobic004G315400 Sobic001G109400--Sobic008G016800 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic004G315400--Sobic001G109400 Sobic004G315400--Sobic001G212900 Sobic004G315400--Sobic008G103400 Sobic001G483001 Sobic001G483001 Sobic004G315400--Sobic001G483001 Sobic004G315400--Sobic004G072201 Sobic005G031400 Sobic005G031400 Sobic004G315400--Sobic005G031400 Sobic004G315400--Sobic002G110600 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic002G398600--Sobic008G192900 Sobic002G398600--Sobic001G212900 Sobic002G398600--Sobic008G103400 Sobic002G398600--Sobic008G016800
Octagon: transcription factors


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