Gene annotation
Transcriptome id Sobic.003G225200.1
Synonym CDPK6, Sb03g028340, CPK3
Functional annotation CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5XR62
Pfam PF13499 PF07714
Panther DB PTHR24349:SF147 PTHR24349
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT4G23650 : calcium-dependent protein kinase 6
RAP-DB (Rice) LOC_Os01g43410.1 : CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a027150 , Zm00025a039723 , Zm00025a037757 , Zm00025a025734 , Zm00025a038581 , Zm00025a047650 , Zm00025a033617 , Zm00025a037842 , Zm00025a032700 , Zm00025a036734 , Zm00025a013124 , Zm00025a048434 , Zm00025a008681
Brachypodium KQK12547 , KQK10428 , KQK04719 , KQK08794 , KQK15660 , KQJ91801 , PNT73937 , KQJ91002 , PNT64929 , PNT64928 , KQK15659
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU6Hr1G016380.1 , HORVU3Hr1G079040.5 , HORVU3Hr1G079040.4 , HORVU3Hr1G079040.7 , HORVU3Hr1G079040.6 , HORVU3Hr1G079040.1 , HORVU3Hr1G079040.3 , HORVU3Hr1G079040.2 , HORVU4Hr1G026640.1 , HORVU4Hr1G026640.4 , HORVU4Hr1G026640.5 , HORVU1Hr1G092710.1 , HORVU1Hr1G092710.2 , HORVU1Hr1G092710.3 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.3 , HORVU3Hr1G055730.5 , HORVU3Hr1G055730.4 , HORVU3Hr1G055730.1 , HORVU3Hr1G055730.3 , HORVU3Hr1G055730.2 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.5 , HORVU7Hr1G056060.6 , HORVU6Hr1G094990.7 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.5 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU6Hr1G094990.1 , HORVU6Hr1G094990.8 , HORVU2Hr1G025890.6 , HORVU2Hr1G025890.7 , HORVU2Hr1G025890.4 , HORVU2Hr1G025890.5 , HORVU2Hr1G025890.2 , HORVU2Hr1G025890.3 , HORVU2Hr1G025890.1 , HORVU2Hr1G025890.8 , HORVU2Hr1G025890.9 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU1Hr1G070840.1 , HORVU1Hr1G070840.2 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.7 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.1 , HORVU3Hr1G087600.8 , HORVU2Hr1G025890.14 , HORVU2Hr1G025890.10 , HORVU2Hr1G025890.11 , HORVU2Hr1G025890.12 , HORVU2Hr1G025890.13 , HORVU6Hr1G064830.1
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS5D02G153800 , TraesCS1A02G424200 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS7B02G165200 , TraesCS2B02G227000 , TraesCS1B02G301600 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS3D02G228700 , TraesCS1B02G456700 , TraesCS3D02G345500 , TraesCS7A02G267000 , TraesCS6A02G261200 , TraesCS2D02G207400 , TraesCS5A02G463100 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS3B02G254500 , TraesCS3A02G224900 , TraesCS6A02G421000 , TraesCS5B02G474500 , TraesCS1D02G433400 , TraesCS3B02G383800 , TraesCS2A02G199700 , TraesCS7D02G267700
Populus -


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cDNA sequences
Sobic.003G225200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G000200 expressed protein -
2 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
3 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
4 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
5 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
6 Sobic.002G110600 regulatory protein, putative, expressed -
7 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
8 Sobic.002G187900 expressed protein -
9 Sobic.007G077466 - -
10 Sobic.001G424650 - -
11 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
12 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
13 Sobic.004G315400 cation efflux family protein, putative, expressed -
14 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
15 Sobic.006G255200 - -
16 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
17 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
18 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
19 Sobic.003G149400 lipase, putative, expressed -
20 Sobic.009G223900 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G225200 Sobic003G225200 Sobic010G000200 Sobic010G000200 Sobic003G225200--Sobic010G000200 Sobic001G212900 Sobic001G212900 Sobic003G225200--Sobic001G212900 Sobic001G503700 Sobic001G503700 Sobic003G225200--Sobic001G503700 Sobic001G492400 Sobic001G492400 Sobic003G225200--Sobic001G492400 Sobic004G173200 Sobic004G173200 Sobic003G225200--Sobic004G173200 Sobic002G110600 Sobic002G110600 Sobic003G225200--Sobic002G110600 Sobic008G103400 Sobic008G103400 Sobic003G225200--Sobic008G103400 Sobic002G187900 Sobic002G187900 Sobic003G225200--Sobic002G187900 Sobic007G077466 Sobic007G077466 Sobic003G225200--Sobic007G077466 Sobic010G000200--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic010G000200--Sobic010G012200 Sobic003G362800 Sobic003G362800 Sobic010G000200--Sobic003G362800 Sobic010G000200--Sobic001G212900 Sobic003G155000 Sobic003G155000 Sobic010G000200--Sobic003G155000 Sobic003G262600 Sobic003G262600 Sobic010G000200--Sobic003G262600 Sobic001G370800 Sobic001G370800 Sobic010G000200--Sobic001G370800 Sobic010G000200--Sobic002G187900 Sobic010G000200--Sobic003G225200 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic006G249600 Sobic006G249600 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic001G212900--Sobic010G000200 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic009G223900 Sobic009G223900 Sobic001G503700--Sobic009G223900 Sobic003G149400 Sobic003G149400 Sobic001G503700--Sobic003G149400 Sobic001G503700--Sobic003G225200 Sobic002G001500 Sobic002G001500 Sobic001G503700--Sobic002G001500 Sobic001G503700--Sobic007G077466 Sobic001G503700--Sobic004G173200 Sobic007G010400 Sobic007G010400 Sobic001G503700--Sobic007G010400 Sobic001G503700--Sobic010G000200 Sobic001G503700--Sobic002G110600 Sobic001G424650 Sobic001G424650 Sobic001G492400--Sobic001G424650 Sobic001G492400--Sobic002G187900 Sobic009G088300 Sobic009G088300 Sobic001G492400--Sobic009G088300 Sobic001G492400--Sobic004G173200 Sobic001G492400--Sobic001G370800 Sobic006G255200 Sobic006G255200 Sobic001G492400--Sobic006G255200 Sobic001G492400--Sobic003G225200 Sobic002G262850 Sobic002G262850 Sobic001G492400--Sobic002G262850 Sobic008G177100 Sobic008G177100 Sobic001G492400--Sobic008G177100 Sobic004G173200--Sobic010G000200 Sobic004G173200--Sobic003G262600 Sobic002G398600 Sobic002G398600 Sobic004G173200--Sobic002G398600 Sobic004G173200--Sobic001G370800 Sobic004G173200--Sobic002G187900 Sobic004G173200--Sobic003G362800 Sobic004G173200--Sobic006G249600 Sobic004G173200--Sobic001G212900 Sobic004G173200--Sobic002G001500 Sobic002G110600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G110600--Sobic008G016800 Sobic002G110600--Sobic001G212900 Sobic002G110600--Sobic003G362800 Sobic002G110600--Sobic004G173200 Sobic002G110600--Sobic010G012200 Sobic002G110600--Sobic001G109400 Sobic004G315400 Sobic004G315400 Sobic002G110600--Sobic004G315400 Sobic002G110600--Sobic002G398600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic008G103400--Sobic004G315400 Sobic003G263900 Sobic003G263900 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic001G191300 Sobic001G191300 Sobic007G077466--Sobic001G191300 Sobic007G077466--Sobic002G001500 Sobic007G077466--Sobic001G503700 Sobic003G118500 Sobic003G118500 Sobic007G077466--Sobic003G118500 Sobic004G305300 Sobic004G305300 Sobic007G077466--Sobic004G305300 Sobic007G077466--Sobic003G362800 Sobic007G077466--Sobic002G110600 Sobic007G077466--Sobic010G000200 Sobic007G077466--Sobic004G173200
Octagon: transcription factors


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