Gene annotation
Transcriptome id Sobic.003G063400.2
Synonym Sb03g005410, IRX9
Functional annotation glycosyltransferase family 43 protein, putative, expressed
UniProt A0A1W0VVZ0
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G37090 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os01g06450.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
2 Sobic.009G026600 - -
3 Sobic.004G093700 tetraspanin family protein, putative, expressed -
4 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
5 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
6 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
7 Sobic.007G183600 expressed protein -
8 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
9 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
11 Sobic.001G370800 - -
12 Sobic.002G374000 - -
13 Sobic.002G187900 expressed protein -
14 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.004G315400 cation efflux family protein, putative, expressed -
16 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
17 Sobic.004G072201 - -
18 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
20 Sobic.006G268900 "STKc_IRAK, catalytic domain of the serine/threonine kinases"(PubMedID : 29491869)@expressed protein -


Gene co-expression network
sample Sobic003G063400 Sobic003G063400 Sobic004G250400 Sobic004G250400 Sobic003G063400--Sobic004G250400 Sobic009G026600 Sobic009G026600 Sobic003G063400--Sobic009G026600 Sobic004G093700 Sobic004G093700 Sobic003G063400--Sobic004G093700 Sobic010G012200 Sobic010G012200 Sobic003G063400--Sobic010G012200 Sobic004G227700 Sobic004G227700 Sobic003G063400--Sobic004G227700 Sobic003G263900 Sobic003G263900 Sobic003G063400--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic003G063400--Sobic007G183600 Sobic010G100700 Sobic010G100700 Sobic003G063400--Sobic010G100700 Sobic008G142200 Sobic008G142200 Sobic003G063400--Sobic008G142200 Sobic004G250400--Sobic003G063400 Sobic004G250400--Sobic009G026600 Sobic004G250400--Sobic004G227700 Sobic001G370800 Sobic001G370800 Sobic004G250400--Sobic001G370800 Sobic004G250400--Sobic004G093700 Sobic004G058400 Sobic004G058400 Sobic004G250400--Sobic004G058400 Sobic004G082600 Sobic004G082600 Sobic004G250400--Sobic004G082600 Sobic004G250400--Sobic010G012200 Sobic006G268900 Sobic006G268900 Sobic004G250400--Sobic006G268900 Sobic009G026600--Sobic001G370800 Sobic009G026600--Sobic003G063400 Sobic005G027350 Sobic005G027350 Sobic009G026600--Sobic005G027350 Sobic001G038700 Sobic001G038700 Sobic009G026600--Sobic001G038700 Sobic009G026600--Sobic004G250400 Sobic001G001800 Sobic001G001800 Sobic009G026600--Sobic001G001800 Sobic008G037300 Sobic008G037300 Sobic009G026600--Sobic008G037300 Sobic002G309300 Sobic002G309300 Sobic009G026600--Sobic002G309300 Sobic009G026600--Sobic010G012200 Sobic004G093700--Sobic010G100700 Sobic004G093700--Sobic003G063400 Sobic004G093700--Sobic009G026600 Sobic008G072800 Sobic008G072800 Sobic004G093700--Sobic008G072800 Sobic004G093700--Sobic007G183600 Sobic004G093700--Sobic004G250400 Sobic004G093700--Sobic008G142200 Sobic007G141900 Sobic007G141900 Sobic004G093700--Sobic007G141900 Sobic002G324801 Sobic002G324801 Sobic004G093700--Sobic002G324801 Sobic001G520000 Sobic001G520000 Sobic010G012200--Sobic001G520000 Sobic003G155000 Sobic003G155000 Sobic010G012200--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic010G012200--Sobic003G253700 Sobic010G012200--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic010G012200--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic004G227700--Sobic008G142200 Sobic002G187900 Sobic002G187900 Sobic004G227700--Sobic002G187900 Sobic009G094200 Sobic009G094200 Sobic004G227700--Sobic009G094200 Sobic004G227700--Sobic004G082600 Sobic004G227700--Sobic003G263900 Sobic004G227700--Sobic003G155000 Sobic004G227700--Sobic003G063400 Sobic006G134300 Sobic006G134300 Sobic004G227700--Sobic006G134300 Sobic004G227700--Sobic004G250400 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic006G255200 Sobic006G255200 Sobic003G263900--Sobic006G255200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic003G263900--Sobic004G227700 Sobic004G072201 Sobic004G072201 Sobic003G263900--Sobic004G072201 Sobic003G069601 Sobic003G069601 Sobic007G183600--Sobic003G069601 Sobic007G183600--Sobic004G072201 Sobic002G374000 Sobic002G374000 Sobic007G183600--Sobic002G374000 Sobic007G183600--Sobic004G093700 Sobic004G068600 Sobic004G068600 Sobic007G183600--Sobic004G068600 Sobic001G383200 Sobic001G383200 Sobic007G183600--Sobic001G383200 Sobic007G183600--Sobic003G063400 Sobic001G442000 Sobic001G442000 Sobic007G183600--Sobic001G442000 Sobic007G183600--Sobic009G026600 Sobic010G100700--Sobic004G093700 Sobic010G100700--Sobic008G072800 Sobic003G023450 Sobic003G023450 Sobic010G100700--Sobic003G023450 Sobic010G100700--Sobic007G141900 Sobic010G100700--Sobic008G142200 Sobic010G100700--Sobic003G063400 Sobic010G100700--Sobic002G324801 Sobic002G012100 Sobic002G012100 Sobic010G100700--Sobic002G012100 Sobic008G132500 Sobic008G132500 Sobic010G100700--Sobic008G132500 Sobic008G142200--Sobic004G227700 Sobic001G191500 Sobic001G191500 Sobic008G142200--Sobic001G191500 Sobic008G142200--Sobic009G094200 Sobic008G190600 Sobic008G190600 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G142200--Sobic008G072800
Octagon: transcription factors


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