Gene annotation
Transcriptome id Sobic.005G031400.1
Synonym Sb05g002650
Functional annotation embryogenesis transmembrane protein, putative, expressed
UniProt A0A1Z5RGJ5
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50140 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os11g04830.1 : embryogenesis transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a033445
Brachypodium KQJ92311 , KQK18556
Barley HORVU5Hr1G043010.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
2 Sobic.006G213350 - -
3 Sobic.001G483001 - -
4 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
5 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
6 Sobic.006G157450 - -
7 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
8 Sobic.004G315400 cation efflux family protein, putative, expressed -
9 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.001G191500 expressed protein -
12 Sobic.004G030850 - -
13 Sobic.002G374000 - -
14 Sobic.009G074800 - -
15 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.006G136300 - -
17 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
18 Sobic.004G118000 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
19 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
20 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic005G031400 Sobic005G031400 Sobic008G190600 Sobic008G190600 Sobic005G031400--Sobic008G190600 Sobic006G213350 Sobic006G213350 Sobic005G031400--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic005G031400--Sobic001G483001 Sobic010G012200 Sobic010G012200 Sobic005G031400--Sobic010G012200 Sobic008G142200 Sobic008G142200 Sobic005G031400--Sobic008G142200 Sobic006G157450 Sobic006G157450 Sobic005G031400--Sobic006G157450 Sobic001G520000 Sobic001G520000 Sobic005G031400--Sobic001G520000 Sobic004G315400 Sobic004G315400 Sobic005G031400--Sobic004G315400 Sobic008G170800 Sobic008G170800 Sobic005G031400--Sobic008G170800 Sobic009G074800 Sobic009G074800 Sobic008G190600--Sobic009G074800 Sobic001G191500 Sobic001G191500 Sobic008G190600--Sobic001G191500 Sobic008G190600--Sobic005G031400 Sobic008G190600--Sobic008G142200 Sobic008G190600--Sobic008G170800 Sobic008G190600--Sobic006G157450 Sobic003G219300 Sobic003G219300 Sobic008G190600--Sobic003G219300 Sobic001G460900 Sobic001G460900 Sobic008G190600--Sobic001G460900 Sobic002G226200 Sobic002G226200 Sobic008G190600--Sobic002G226200 Sobic006G213350--Sobic001G520000 Sobic006G213350--Sobic005G031400 Sobic006G213350--Sobic001G483001 Sobic008G160100 Sobic008G160100 Sobic006G213350--Sobic008G160100 Sobic006G213350--Sobic010G012200 Sobic008G143901 Sobic008G143901 Sobic006G213350--Sobic008G143901 Sobic003G253700 Sobic003G253700 Sobic006G213350--Sobic003G253700 Sobic006G243000 Sobic006G243000 Sobic006G213350--Sobic006G243000 Sobic006G213350--Sobic006G157450 Sobic001G483001--Sobic001G520000 Sobic001G483001--Sobic006G213350 Sobic001G483001--Sobic008G143901 Sobic001G483001--Sobic008G160100 Sobic001G483001--Sobic006G157450 Sobic001G483001--Sobic005G031400 Sobic001G483001--Sobic008G170800 Sobic001G483001--Sobic010G012200 Sobic001G483001--Sobic003G253700 Sobic010G012200--Sobic001G520000 Sobic003G155000 Sobic003G155000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic004G227700 Sobic004G227700 Sobic008G142200--Sobic004G227700 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G142200--Sobic008G190600 Sobic003G263900 Sobic003G263900 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic006G157450--Sobic008G190600 Sobic001G520000--Sobic003G253700 Sobic001G520000--Sobic006G213350 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic002G374000 Sobic002G374000 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic001G109400 Sobic001G109400 Sobic004G315400--Sobic001G109400 Sobic001G212900 Sobic001G212900 Sobic004G315400--Sobic001G212900 Sobic004G315400--Sobic008G103400 Sobic004G315400--Sobic001G483001 Sobic004G072201 Sobic004G072201 Sobic004G315400--Sobic004G072201 Sobic004G315400--Sobic005G031400 Sobic002G110600 Sobic002G110600 Sobic004G315400--Sobic002G110600 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700
Octagon: transcription factors


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