Gene annotation
Transcriptome id Sobic.003G253700.1
Synonym Sb03g030900
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5XG38
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g48360.2 : expressed protein
MaizeGDB (Corn) Zm00025a038808
Brachypodium KQK09156
Barley -
Wheat TraesCS3A02G270900 , TraesCS3B02G304700
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
2 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
3 Sobic.003G365200 expressed protein -
4 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
5 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.006G157450 - -
7 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
8 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
10 Sobic.002G209450 - -
11 Sobic.001G483001 - -
12 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
13 Sobic.003G362800 - -
14 Sobic.002G206900 GEX2, putative, expressed -
15 Sobic.006G134300 - -
16 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
17 Sobic.006G213350 - -
18 Sobic.002G187900 expressed protein -
19 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
20 Sobic.005G048800 expressed protein -


Gene co-expression network
sample Sobic003G253700 Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic003G253700--Sobic003G155000 Sobic001G520000 Sobic001G520000 Sobic003G253700--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic003G253700--Sobic003G365200 Sobic010G012200 Sobic010G012200 Sobic003G253700--Sobic010G012200 Sobic006G249600 Sobic006G249600 Sobic003G253700--Sobic006G249600 Sobic006G157450 Sobic006G157450 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic008G170800 Sobic008G170800 Sobic003G253700--Sobic008G170800 Sobic003G262600 Sobic003G262600 Sobic003G253700--Sobic003G262600 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G155000--Sobic003G365200 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic001G520000--Sobic003G253700 Sobic006G213350 Sobic006G213350 Sobic001G520000--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic008G160100 Sobic008G160100 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic003G365200--Sobic003G253700 Sobic003G365200--Sobic003G155000 Sobic003G365200--Sobic001G520000 Sobic006G134300 Sobic006G134300 Sobic003G365200--Sobic006G134300 Sobic003G365200--Sobic010G012200 Sobic003G365200--Sobic003G262600 Sobic003G365200--Sobic003G155800 Sobic004G227700 Sobic004G227700 Sobic003G365200--Sobic004G227700 Sobic003G365200--Sobic006G249600 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic001G212900 Sobic001G212900 Sobic006G249600--Sobic001G212900 Sobic002G398600 Sobic002G398600 Sobic006G249600--Sobic002G398600 Sobic002G187900 Sobic002G187900 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic003G263900 Sobic003G263900 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic004G173200 Sobic004G173200 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic003G362800 Sobic003G362800 Sobic003G155800--Sobic003G362800 Sobic004G181000 Sobic004G181000 Sobic003G155800--Sobic004G181000 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic009G223900 Sobic009G223900 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic002G001500 Sobic002G001500 Sobic003G155800--Sobic002G001500 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G262600--Sobic003G365200 Sobic003G262600--Sobic009G223900 Sobic003G262600--Sobic003G362800
Octagon: transcription factors


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