Gene annotation
Transcriptome id Sobic.001G483001.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB92
Pfam -
Panther DB PTHR34045
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72490 : -
RAP-DB (Rice) LOC_Os03g08290.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
2 Sobic.006G213350 - -
3 Sobic.008G143901 - -
4 Sobic.008G160100 - -
5 Sobic.006G157450 - -
6 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
7 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
8 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
9 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
11 Sobic.002G206900 GEX2, putative, expressed -
12 Sobic.004G315400 cation efflux family protein, putative, expressed -
13 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
14 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
15 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
16 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
17 Sobic.007G046600 - -
18 Sobic.001G090700 expressed protein -
19 Sobic.002G209450 - -
20 Sobic.010G042300 DTA2, putative, expressed -


Gene co-expression network
sample Sobic001G483001 Sobic001G483001 Sobic001G520000 Sobic001G520000 Sobic001G483001--Sobic001G520000 Sobic006G213350 Sobic006G213350 Sobic001G483001--Sobic006G213350 Sobic008G143901 Sobic008G143901 Sobic001G483001--Sobic008G143901 Sobic008G160100 Sobic008G160100 Sobic001G483001--Sobic008G160100 Sobic006G157450 Sobic006G157450 Sobic001G483001--Sobic006G157450 Sobic005G031400 Sobic005G031400 Sobic001G483001--Sobic005G031400 Sobic008G170800 Sobic008G170800 Sobic001G483001--Sobic008G170800 Sobic010G012200 Sobic010G012200 Sobic001G483001--Sobic010G012200 Sobic003G253700 Sobic003G253700 Sobic001G483001--Sobic003G253700 Sobic001G520000--Sobic003G253700 Sobic001G520000--Sobic006G213350 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic003G155000 Sobic003G155000 Sobic001G520000--Sobic003G155000 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic006G213350--Sobic001G520000 Sobic006G213350--Sobic005G031400 Sobic006G213350--Sobic001G483001 Sobic006G213350--Sobic008G160100 Sobic006G213350--Sobic010G012200 Sobic006G213350--Sobic008G143901 Sobic006G213350--Sobic003G253700 Sobic006G243000 Sobic006G243000 Sobic006G213350--Sobic006G243000 Sobic006G213350--Sobic006G157450 Sobic008G143901--Sobic001G483001 Sobic008G143901--Sobic006G243000 Sobic008G143901--Sobic006G213350 Sobic002G413700 Sobic002G413700 Sobic008G143901--Sobic002G413700 Sobic008G143901--Sobic001G520000 Sobic008G143901--Sobic008G160100 Sobic001G139800 Sobic001G139800 Sobic008G143901--Sobic001G139800 Sobic008G143901--Sobic001G096200 Sobic001G156401 Sobic001G156401 Sobic008G143901--Sobic001G156401 Sobic008G160100--Sobic001G520000 Sobic008G160100--Sobic001G483001 Sobic008G160100--Sobic006G213350 Sobic005G228650 Sobic005G228650 Sobic008G160100--Sobic005G228650 Sobic004G026000 Sobic004G026000 Sobic008G160100--Sobic004G026000 Sobic004G310400 Sobic004G310400 Sobic008G160100--Sobic004G310400 Sobic004G315400 Sobic004G315400 Sobic008G160100--Sobic004G315400 Sobic008G160100--Sobic008G143901 Sobic008G160100--Sobic010G012200 Sobic001G038700 Sobic001G038700 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic005G031400--Sobic008G190600 Sobic005G031400--Sobic006G213350 Sobic005G031400--Sobic001G483001 Sobic005G031400--Sobic010G012200 Sobic008G142200 Sobic008G142200 Sobic005G031400--Sobic008G142200 Sobic005G031400--Sobic006G157450 Sobic005G031400--Sobic001G520000 Sobic005G031400--Sobic004G315400 Sobic005G031400--Sobic008G170800 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic003G253700--Sobic003G365200 Sobic003G253700--Sobic010G012200 Sobic006G249600 Sobic006G249600 Sobic003G253700--Sobic006G249600 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic003G253700--Sobic008G170800 Sobic003G262600 Sobic003G262600 Sobic003G253700--Sobic003G262600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.