Gene annotation
Transcriptome id Sobic.009G252600.1
Synonym Sb09g030330, BCS1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
mitochondrial chaperone BCS1, putative, expressed
UniProt C5YWX7
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF12
NCBI CDD -
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G50930 : cytochrome BC1 synthesis
RAP-DB (Rice) LOC_Os05g51130.1 : mitochondrial chaperone BCS1, putative, expressed
MaizeGDB (Corn) Zm00025a028637 , Zm00025a044783 , Zm00025a044781 , Zm00025a036761
Brachypodium KQK08635
Barley HORVU1Hr1G093760.10 , HORVU1Hr1G093760.11 , HORVU1Hr1G093760.12 , HORVU1Hr1G093760.13 , HORVU1Hr1G093710.1 , HORVU1Hr1G093760.8 , HORVU1Hr1G093760.9 , HORVU1Hr1G093760.2 , HORVU1Hr1G093760.1 , HORVU1Hr1G093760.6 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2
Wheat TraesCS1D02G439400 , TraesCS1A02G430000 , TraesCS1B02G464900 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS1A02G429300 , TraesCS1D02G438800 , TraesCS1D02G439300 , TraesCS1B02G464100 , TraesCS1A02G430100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G252600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G251900 expressed protein -
2 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
3 Sobic.001G093732 - -
4 Sobic.002G206900 GEX2, putative, expressed -
5 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
6 Sobic.001G483001 - -
7 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.010G261500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
9 Sobic.006G157450 - -
10 Sobic.003G362800 - -
11 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G209450 - -
13 Sobic.008G160100 - -
14 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
15 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
16 Sobic.005G096201 - -
17 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
18 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
19 Sobic.001G312801 - -
20 Sobic.007G046600 - -


Gene co-expression network
sample Sobic009G252600 Sobic009G252600 Sobic003G251900 Sobic003G251900 Sobic009G252600--Sobic003G251900 Sobic003G155800 Sobic003G155800 Sobic009G252600--Sobic003G155800 Sobic001G093732 Sobic001G093732 Sobic009G252600--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic009G252600--Sobic002G206900 Sobic001G520000 Sobic001G520000 Sobic009G252600--Sobic001G520000 Sobic001G483001 Sobic001G483001 Sobic009G252600--Sobic001G483001 Sobic003G253700 Sobic003G253700 Sobic009G252600--Sobic003G253700 Sobic010G261500 Sobic010G261500 Sobic009G252600--Sobic010G261500 Sobic006G157450 Sobic006G157450 Sobic009G252600--Sobic006G157450 Sobic003G251900--Sobic009G252600 Sobic004G181000 Sobic004G181000 Sobic003G251900--Sobic004G181000 Sobic003G251900--Sobic003G155800 Sobic005G014400 Sobic005G014400 Sobic003G251900--Sobic005G014400 Sobic010G201444 Sobic010G201444 Sobic003G251900--Sobic010G201444 Sobic003G251900--Sobic001G093732 Sobic003G251900--Sobic002G206900 Sobic009G199900 Sobic009G199900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic009G223900 Sobic009G223900 Sobic003G155800--Sobic009G223900 Sobic003G155800--Sobic009G252600 Sobic002G001500 Sobic002G001500 Sobic003G155800--Sobic002G001500 Sobic003G155800--Sobic001G520000 Sobic003G155800--Sobic002G206900 Sobic001G093732--Sobic009G252600 Sobic001G093732--Sobic010G201444 Sobic001G093732--Sobic003G251900 Sobic001G093732--Sobic005G014400 Sobic008G007200 Sobic008G007200 Sobic001G093732--Sobic008G007200 Sobic001G093732--Sobic001G483001 Sobic007G046600 Sobic007G046600 Sobic001G093732--Sobic007G046600 Sobic006G154900 Sobic006G154900 Sobic001G093732--Sobic006G154900 Sobic006G279100 Sobic006G279100 Sobic001G093732--Sobic006G279100 Sobic001G454600 Sobic001G454600 Sobic002G206900--Sobic001G454600 Sobic003G155000 Sobic003G155000 Sobic002G206900--Sobic003G155000 Sobic002G206900--Sobic003G155800 Sobic002G206900--Sobic003G362800 Sobic002G206900--Sobic003G253700 Sobic002G206900--Sobic001G483001 Sobic002G206900--Sobic001G520000 Sobic008G170800 Sobic008G170800 Sobic002G206900--Sobic008G170800 Sobic002G206900--Sobic009G252600 Sobic001G520000--Sobic003G253700 Sobic006G213350 Sobic006G213350 Sobic001G520000--Sobic006G213350 Sobic001G520000--Sobic001G483001 Sobic010G012200 Sobic010G012200 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic008G160100 Sobic008G160100 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic001G483001--Sobic001G520000 Sobic001G483001--Sobic006G213350 Sobic008G143901 Sobic008G143901 Sobic001G483001--Sobic008G143901 Sobic001G483001--Sobic008G160100 Sobic001G483001--Sobic006G157450 Sobic005G031400 Sobic005G031400 Sobic001G483001--Sobic005G031400 Sobic001G483001--Sobic008G170800 Sobic001G483001--Sobic010G012200 Sobic001G483001--Sobic003G253700 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic003G253700--Sobic003G365200 Sobic003G253700--Sobic010G012200 Sobic006G249600 Sobic006G249600 Sobic003G253700--Sobic006G249600 Sobic003G253700--Sobic006G157450 Sobic003G253700--Sobic003G155800 Sobic003G253700--Sobic008G170800 Sobic003G262600 Sobic003G262600 Sobic003G253700--Sobic003G262600 Sobic009G252500 Sobic009G252500 Sobic010G261500--Sobic009G252500 Sobic010G261500--Sobic007G046600 Sobic001G350800 Sobic001G350800 Sobic010G261500--Sobic001G350800 Sobic010G261500--Sobic009G252600 Sobic004G314100 Sobic004G314100 Sobic010G261500--Sobic004G314100 Sobic004G190800 Sobic004G190800 Sobic010G261500--Sobic004G190800 Sobic004G053600 Sobic004G053600 Sobic010G261500--Sobic004G053600 Sobic001G010900 Sobic001G010900 Sobic010G261500--Sobic001G010900 Sobic003G298000 Sobic003G298000 Sobic010G261500--Sobic003G298000 Sobic001G038700 Sobic001G038700 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.