Gene annotation
Transcriptome id Sobic.009G252500.1
Synonym Sb09g030320, BCS1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
mitochondrial chaperone BCS1, putative, expressed
UniProt C5YWX6
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF12
NCBI CDD -
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G50930 : cytochrome BC1 synthesis
RAP-DB (Rice) LOC_Os05g51130.1 : mitochondrial chaperone BCS1, putative, expressed
MaizeGDB (Corn) Zm00025a028637 , Zm00025a044783 , Zm00025a044781 , Zm00025a036761
Brachypodium KQK08635
Barley HORVU1Hr1G093760.10 , HORVU1Hr1G093760.11 , HORVU1Hr1G093760.12 , HORVU1Hr1G093760.13 , HORVU1Hr1G093710.1 , HORVU1Hr1G093760.8 , HORVU1Hr1G093760.9 , HORVU1Hr1G093760.2 , HORVU1Hr1G093760.1 , HORVU1Hr1G093760.6 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2
Wheat TraesCS1D02G439400 , TraesCS1A02G430000 , TraesCS1B02G464900 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS1D02G439300 , TraesCS1B02G464100 , TraesCS1A02G430100
Populus -


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cDNA sequences
Sobic.009G252500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G046600 - -
2 Sobic.003G298000 - -
3 Sobic.002G209450 - -
4 Sobic.003G241600 - -
5 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
6 Sobic.009G049100 - -
7 Sobic.010G261500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
8 Sobic.001G494400 DUF593 domain containing protein, expressed -
9 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.002G013600 expressed protein -
11 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
12 Sobic.001G483001 - -
13 Sobic.005G096201 - -
14 Sobic.004G053600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@urease accessory protein F, putative, expressed K03188: urease accessory protein
15 Sobic.004G205900 - -
16 Sobic.002G231400 - -
17 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.006G157450 - -
19 Sobic.001G312801 - -
20 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic009G252500 Sobic009G252500 Sobic007G046600 Sobic007G046600 Sobic009G252500--Sobic007G046600 Sobic003G298000 Sobic003G298000 Sobic009G252500--Sobic003G298000 Sobic002G209450 Sobic002G209450 Sobic009G252500--Sobic002G209450 Sobic003G241600 Sobic003G241600 Sobic009G252500--Sobic003G241600 Sobic004G190800 Sobic004G190800 Sobic009G252500--Sobic004G190800 Sobic009G049100 Sobic009G049100 Sobic009G252500--Sobic009G049100 Sobic010G261500 Sobic010G261500 Sobic009G252500--Sobic010G261500 Sobic001G494400 Sobic001G494400 Sobic009G252500--Sobic001G494400 Sobic008G170800 Sobic008G170800 Sobic009G252500--Sobic008G170800 Sobic007G046600--Sobic009G252500 Sobic007G046600--Sobic003G298000 Sobic007G046600--Sobic002G209450 Sobic007G046600--Sobic003G241600 Sobic007G046600--Sobic008G170800 Sobic004G053600 Sobic004G053600 Sobic007G046600--Sobic004G053600 Sobic003G155000 Sobic003G155000 Sobic007G046600--Sobic003G155000 Sobic007G046600--Sobic004G190800 Sobic001G010900 Sobic001G010900 Sobic007G046600--Sobic001G010900 Sobic003G298000--Sobic009G252500 Sobic003G298000--Sobic001G494400 Sobic003G298000--Sobic007G046600 Sobic003G298000--Sobic002G209450 Sobic003G298000--Sobic001G010900 Sobic003G298000--Sobic009G049100 Sobic004G144300 Sobic004G144300 Sobic003G298000--Sobic004G144300 Sobic004G310400 Sobic004G310400 Sobic003G298000--Sobic004G310400 Sobic001G520000 Sobic001G520000 Sobic003G298000--Sobic001G520000 Sobic005G096201 Sobic005G096201 Sobic002G209450--Sobic005G096201 Sobic002G209450--Sobic009G252500 Sobic003G253700 Sobic003G253700 Sobic002G209450--Sobic003G253700 Sobic002G209450--Sobic003G298000 Sobic002G209450--Sobic007G046600 Sobic002G209450--Sobic003G155000 Sobic002G209450--Sobic001G520000 Sobic002G209450--Sobic001G494400 Sobic001G191500 Sobic001G191500 Sobic002G209450--Sobic001G191500 Sobic002G231400 Sobic002G231400 Sobic003G241600--Sobic002G231400 Sobic001G018550 Sobic001G018550 Sobic003G241600--Sobic001G018550 Sobic003G241600--Sobic009G252500 Sobic003G241600--Sobic007G046600 Sobic003G429600 Sobic003G429600 Sobic003G241600--Sobic003G429600 Sobic002G013600 Sobic002G013600 Sobic003G241600--Sobic002G013600 Sobic004G288900 Sobic004G288900 Sobic003G241600--Sobic004G288900 Sobic003G305250 Sobic003G305250 Sobic003G241600--Sobic003G305250 Sobic003G241600--Sobic005G096201 Sobic004G190800--Sobic002G013600 Sobic001G312801 Sobic001G312801 Sobic004G190800--Sobic001G312801 Sobic004G190800--Sobic009G049100 Sobic002G360701 Sobic002G360701 Sobic004G190800--Sobic002G360701 Sobic007G061500 Sobic007G061500 Sobic004G190800--Sobic007G061500 Sobic001G350800 Sobic001G350800 Sobic004G190800--Sobic001G350800 Sobic004G314100 Sobic004G314100 Sobic004G190800--Sobic004G314100 Sobic004G190800--Sobic004G288900 Sobic002G346250 Sobic002G346250 Sobic004G190800--Sobic002G346250 Sobic008G024700 Sobic008G024700 Sobic009G049100--Sobic008G024700 Sobic001G460150 Sobic001G460150 Sobic009G049100--Sobic001G460150 Sobic003G336300 Sobic003G336300 Sobic009G049100--Sobic003G336300 Sobic009G049100--Sobic004G190800 Sobic009G049100--Sobic004G144300 Sobic009G049100--Sobic009G252500 Sobic009G049100--Sobic003G298000 Sobic009G049100--Sobic004G310400 Sobic009G049100--Sobic007G046600 Sobic010G261500--Sobic009G252500 Sobic010G261500--Sobic007G046600 Sobic010G261500--Sobic001G350800 Sobic009G252600 Sobic009G252600 Sobic010G261500--Sobic009G252600 Sobic010G261500--Sobic004G314100 Sobic010G261500--Sobic004G190800 Sobic010G261500--Sobic004G053600 Sobic010G261500--Sobic001G010900 Sobic010G261500--Sobic003G298000 Sobic001G494400--Sobic003G298000 Sobic003G139100 Sobic003G139100 Sobic001G494400--Sobic003G139100 Sobic001G494400--Sobic002G013600 Sobic001G494400--Sobic002G209450 Sobic001G494400--Sobic005G096201 Sobic001G494400--Sobic001G010900 Sobic002G038200 Sobic002G038200 Sobic001G494400--Sobic002G038200 Sobic001G494400--Sobic007G061500 Sobic001G341900 Sobic001G341900 Sobic001G494400--Sobic001G341900 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic006G157450 Sobic006G157450 Sobic008G170800--Sobic006G157450 Sobic001G038700 Sobic001G038700 Sobic008G170800--Sobic001G038700 Sobic010G012200 Sobic010G012200 Sobic008G170800--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700
Octagon: transcription factors


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