Gene annotation
Transcriptome id Sobic.007G046600.1
Synonym
Functional annotation -
UniProt A0A1B6PFL2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G046600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
2 Sobic.003G298000 - -
3 Sobic.002G209450 - -
4 Sobic.003G241600 - -
5 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.004G053600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@urease accessory protein F, putative, expressed K03188: urease accessory protein
7 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
8 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
9 Sobic.001G010900 OsGrx_S14 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
10 Sobic.004G205900 - -
11 Sobic.002G206900 GEX2, putative, expressed -
12 Sobic.002G013600 expressed protein -
13 Sobic.010G261500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
14 Sobic.004G144300 - -
15 Sobic.009G049100 - -
16 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
17 Sobic.004G165600 glycosyl hydrolases family 17, putative, expressed -
18 Sobic.001G483001 - -
19 Sobic.005G048800 expressed protein -
20 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G046600 Sobic007G046600 Sobic009G252500 Sobic009G252500 Sobic007G046600--Sobic009G252500 Sobic003G298000 Sobic003G298000 Sobic007G046600--Sobic003G298000 Sobic002G209450 Sobic002G209450 Sobic007G046600--Sobic002G209450 Sobic003G241600 Sobic003G241600 Sobic007G046600--Sobic003G241600 Sobic008G170800 Sobic008G170800 Sobic007G046600--Sobic008G170800 Sobic004G053600 Sobic004G053600 Sobic007G046600--Sobic004G053600 Sobic003G155000 Sobic003G155000 Sobic007G046600--Sobic003G155000 Sobic004G190800 Sobic004G190800 Sobic007G046600--Sobic004G190800 Sobic001G010900 Sobic001G010900 Sobic007G046600--Sobic001G010900 Sobic009G252500--Sobic007G046600 Sobic009G252500--Sobic003G298000 Sobic009G252500--Sobic002G209450 Sobic009G252500--Sobic003G241600 Sobic009G252500--Sobic004G190800 Sobic009G049100 Sobic009G049100 Sobic009G252500--Sobic009G049100 Sobic010G261500 Sobic010G261500 Sobic009G252500--Sobic010G261500 Sobic001G494400 Sobic001G494400 Sobic009G252500--Sobic001G494400 Sobic009G252500--Sobic008G170800 Sobic003G298000--Sobic009G252500 Sobic003G298000--Sobic001G494400 Sobic003G298000--Sobic007G046600 Sobic003G298000--Sobic002G209450 Sobic003G298000--Sobic001G010900 Sobic003G298000--Sobic009G049100 Sobic004G144300 Sobic004G144300 Sobic003G298000--Sobic004G144300 Sobic004G310400 Sobic004G310400 Sobic003G298000--Sobic004G310400 Sobic001G520000 Sobic001G520000 Sobic003G298000--Sobic001G520000 Sobic005G096201 Sobic005G096201 Sobic002G209450--Sobic005G096201 Sobic002G209450--Sobic009G252500 Sobic003G253700 Sobic003G253700 Sobic002G209450--Sobic003G253700 Sobic002G209450--Sobic003G298000 Sobic002G209450--Sobic007G046600 Sobic002G209450--Sobic003G155000 Sobic002G209450--Sobic001G520000 Sobic002G209450--Sobic001G494400 Sobic001G191500 Sobic001G191500 Sobic002G209450--Sobic001G191500 Sobic002G231400 Sobic002G231400 Sobic003G241600--Sobic002G231400 Sobic001G018550 Sobic001G018550 Sobic003G241600--Sobic001G018550 Sobic003G241600--Sobic009G252500 Sobic003G241600--Sobic007G046600 Sobic003G429600 Sobic003G429600 Sobic003G241600--Sobic003G429600 Sobic002G013600 Sobic002G013600 Sobic003G241600--Sobic002G013600 Sobic004G288900 Sobic004G288900 Sobic003G241600--Sobic004G288900 Sobic003G305250 Sobic003G305250 Sobic003G241600--Sobic003G305250 Sobic003G241600--Sobic005G096201 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic006G157450 Sobic006G157450 Sobic008G170800--Sobic006G157450 Sobic001G038700 Sobic001G038700 Sobic008G170800--Sobic001G038700 Sobic010G012200 Sobic010G012200 Sobic008G170800--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic004G053600--Sobic007G046600 Sobic004G165600 Sobic004G165600 Sobic004G053600--Sobic004G165600 Sobic004G053600--Sobic004G190800 Sobic004G053600--Sobic002G013600 Sobic002G413700 Sobic002G413700 Sobic004G053600--Sobic002G413700 Sobic004G053600--Sobic009G252500 Sobic004G053600--Sobic005G096201 Sobic004G053600--Sobic002G209450 Sobic004G053600--Sobic003G241600 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G365200 Sobic003G365200 Sobic003G155000--Sobic003G365200 Sobic003G262600 Sobic003G262600 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic006G249600 Sobic006G249600 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic004G190800--Sobic002G013600 Sobic001G312801 Sobic001G312801 Sobic004G190800--Sobic001G312801 Sobic004G190800--Sobic009G049100 Sobic002G360701 Sobic002G360701 Sobic004G190800--Sobic002G360701 Sobic007G061500 Sobic007G061500 Sobic004G190800--Sobic007G061500 Sobic001G350800 Sobic001G350800 Sobic004G190800--Sobic001G350800 Sobic004G314100 Sobic004G314100 Sobic004G190800--Sobic004G314100 Sobic004G190800--Sobic004G288900 Sobic002G346250 Sobic002G346250 Sobic004G190800--Sobic002G346250 Sobic001G010900--Sobic003G298000 Sobic001G010900--Sobic001G494400 Sobic001G010900--Sobic007G046600 Sobic001G010900--Sobic004G165600 Sobic001G010900--Sobic002G013600 Sobic001G010900--Sobic010G261500 Sobic001G010900--Sobic004G314100 Sobic001G096200 Sobic001G096200 Sobic001G010900--Sobic001G096200 Sobic001G010900--Sobic004G144300
Octagon: transcription factors


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