Gene annotation
Transcriptome id Sobic.004G165600.1
Synonym Sb04g021700
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt C5XTF0
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G27500 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g33000.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a011515 , Zm00025a050933 , Zm00025a031488 , Zm00025a001555 , Zm00025a045468 , Zm00025a039585
Brachypodium KQJ82509 , KQJ99728 , KQK22621
Barley HORVU2Hr1G072890.8 , HORVU2Hr1G072890.9 , HORVU2Hr1G072890.2 , HORVU2Hr1G072890.3 , HORVU2Hr1G072890.1 , HORVU2Hr1G072890.6 , HORVU2Hr1G072890.7 , HORVU2Hr1G072890.4 , HORVU2Hr1G072890.5 , HORVU3Hr1G067280.8 , HORVU3Hr1G067280.9 , HORVU3Hr1G067280.1 , HORVU3Hr1G067280.3 , HORVU3Hr1G067280.4 , HORVU3Hr1G067280.5 , HORVU3Hr1G067280.6 , HORVU3Hr1G067280.7 , HORVU3Hr1G067280.10 , HORVU3Hr1G067280.11 , HORVU3Hr1G067280.2 , HORVU2Hr1G072890.10 , HORVU2Hr1G072890.11
Wheat TraesCS3D02G249500 , TraesCS3D02G249500 , TraesCS3B02G278400 , TraesCS2B02G311200 , TraesCS2B02G311200 , TraesCS2A02G294700 , TraesCS2A02G294700 , TraesCS2D02G292500 , TraesCS2D02G292500 , TraesCS3A02G249500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G342600 cytidylyltransferase domain containing protein, expressed K06210: nicotinamide mononucleotide adenylyltransferase
2 Sobic.006G152900 - -
3 Sobic.002G013600 expressed protein -
4 Sobic.010G150000 - -
5 Sobic.005G096201 - -
6 Sobic.004G053600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@urease accessory protein F, putative, expressed K03188: urease accessory protein
7 Sobic.002G038200 deoxyribonuclease tatD, putative, expressed K03424: TatD DNase family protein
8 Sobic.007G046600 - -
9 Sobic.001G494400 DUF593 domain containing protein, expressed -
10 Sobic.002G209450 - -
11 Sobic.001G010900 OsGrx_S14 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
12 Sobic.010G219700 fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
13 Sobic.001G018550 - -
14 Sobic.004G224100 RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
15 Sobic.004G200000 expressed protein -
16 Sobic.003G241600 - -
17 Sobic.002G346250 - -
18 Sobic.002G231400 - -
19 Sobic.003G139100 - -
20 Sobic.004G047001 - -


Gene co-expression network
sample Sobic004G165600 Sobic004G165600 Sobic004G342600 Sobic004G342600 Sobic004G165600--Sobic004G342600 Sobic006G152900 Sobic006G152900 Sobic004G165600--Sobic006G152900 Sobic002G013600 Sobic002G013600 Sobic004G165600--Sobic002G013600 Sobic010G150000 Sobic010G150000 Sobic004G165600--Sobic010G150000 Sobic005G096201 Sobic005G096201 Sobic004G165600--Sobic005G096201 Sobic004G053600 Sobic004G053600 Sobic004G165600--Sobic004G053600 Sobic002G038200 Sobic002G038200 Sobic004G165600--Sobic002G038200 Sobic007G046600 Sobic007G046600 Sobic004G165600--Sobic007G046600 Sobic001G494400 Sobic001G494400 Sobic004G165600--Sobic001G494400 Sobic004G342600--Sobic004G165600 Sobic004G342600--Sobic002G038200 Sobic004G342600--Sobic006G152900 Sobic004G342600--Sobic010G150000 Sobic001G124500 Sobic001G124500 Sobic004G342600--Sobic001G124500 Sobic004G342600--Sobic002G013600 Sobic010G219700 Sobic010G219700 Sobic004G342600--Sobic010G219700 Sobic006G142700 Sobic006G142700 Sobic004G342600--Sobic006G142700 Sobic008G013700 Sobic008G013700 Sobic004G342600--Sobic008G013700 Sobic006G152900--Sobic002G038200 Sobic006G152900--Sobic004G165600 Sobic006G152900--Sobic010G150000 Sobic006G152900--Sobic004G342600 Sobic006G152900--Sobic010G219700 Sobic006G152900--Sobic006G142700 Sobic006G152900--Sobic001G124500 Sobic001G345366 Sobic001G345366 Sobic006G152900--Sobic001G345366 Sobic004G200000 Sobic004G200000 Sobic006G152900--Sobic004G200000 Sobic004G190800 Sobic004G190800 Sobic002G013600--Sobic004G190800 Sobic004G224100 Sobic004G224100 Sobic002G013600--Sobic004G224100 Sobic002G013600--Sobic005G096201 Sobic003G139100 Sobic003G139100 Sobic002G013600--Sobic003G139100 Sobic002G013600--Sobic004G165600 Sobic002G013600--Sobic001G494400 Sobic007G061500 Sobic007G061500 Sobic002G013600--Sobic007G061500 Sobic002G346250 Sobic002G346250 Sobic002G013600--Sobic002G346250 Sobic003G241600 Sobic003G241600 Sobic002G013600--Sobic003G241600 Sobic010G150000--Sobic006G152900 Sobic010G150000--Sobic004G165600 Sobic010G150000--Sobic005G096201 Sobic010G150000--Sobic004G342600 Sobic002G209450 Sobic002G209450 Sobic010G150000--Sobic002G209450 Sobic010G150000--Sobic002G038200 Sobic009G215350 Sobic009G215350 Sobic010G150000--Sobic009G215350 Sobic007G099300 Sobic007G099300 Sobic010G150000--Sobic007G099300 Sobic003G429600 Sobic003G429600 Sobic010G150000--Sobic003G429600 Sobic005G096201--Sobic002G209450 Sobic005G096201--Sobic004G224100 Sobic005G096201--Sobic002G013600 Sobic005G096201--Sobic003G139100 Sobic005G096201--Sobic010G150000 Sobic002G231400 Sobic002G231400 Sobic005G096201--Sobic002G231400 Sobic005G096201--Sobic004G165600 Sobic005G096201--Sobic001G494400 Sobic005G096201--Sobic003G429600 Sobic004G053600--Sobic007G046600 Sobic004G053600--Sobic004G165600 Sobic004G053600--Sobic004G190800 Sobic004G053600--Sobic002G013600 Sobic002G413700 Sobic002G413700 Sobic004G053600--Sobic002G413700 Sobic009G252500 Sobic009G252500 Sobic004G053600--Sobic009G252500 Sobic004G053600--Sobic005G096201 Sobic004G053600--Sobic002G209450 Sobic004G053600--Sobic003G241600 Sobic002G038200--Sobic006G152900 Sobic009G250000 Sobic009G250000 Sobic002G038200--Sobic009G250000 Sobic002G038200--Sobic004G342600 Sobic009G082500 Sobic009G082500 Sobic002G038200--Sobic009G082500 Sobic002G038200--Sobic006G142700 Sobic002G038200--Sobic010G150000 Sobic002G038200--Sobic004G165600 Sobic002G038200--Sobic001G494400 Sobic002G282000 Sobic002G282000 Sobic002G038200--Sobic002G282000 Sobic007G046600--Sobic009G252500 Sobic003G298000 Sobic003G298000 Sobic007G046600--Sobic003G298000 Sobic007G046600--Sobic002G209450 Sobic007G046600--Sobic003G241600 Sobic008G170800 Sobic008G170800 Sobic007G046600--Sobic008G170800 Sobic007G046600--Sobic004G053600 Sobic003G155000 Sobic003G155000 Sobic007G046600--Sobic003G155000 Sobic007G046600--Sobic004G190800 Sobic001G010900 Sobic001G010900 Sobic007G046600--Sobic001G010900 Sobic001G494400--Sobic003G298000 Sobic001G494400--Sobic003G139100 Sobic001G494400--Sobic002G013600 Sobic001G494400--Sobic002G209450 Sobic001G494400--Sobic005G096201 Sobic001G494400--Sobic001G010900 Sobic001G494400--Sobic002G038200 Sobic001G494400--Sobic007G061500 Sobic001G341900 Sobic001G341900 Sobic001G494400--Sobic001G341900
Octagon: transcription factors


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