Gene annotation
Transcriptome id Sobic.006G152900.1
Synonym YSL7, Sb06g023040
Functional annotation -
UniProt A0A1B6PM55
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65730 : YELLOW STRIPE like 7
RAP-DB (Rice) LOC_Os04g44320.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a032072 , Zm00025a057370 , Zm00025a020927 , Zm00025a010381 , Zm00025a056642 , Zm00025a021051 , Zm00025a056539 , Zm00025a056537
Brachypodium KQK00558 , KQK00557 , KQJ83669 , PNT69110 , KQJ85264 , KQJ83671 , KQJ83861 , KQJ83860 , PNT61582 , KQJ83865 , PNT61581
Barley HORVU2Hr1G092880.8 , HORVU2Hr1G092880.7 , HORVU2Hr1G092880.6 , HORVU2Hr1G092880.5 , HORVU2Hr1G092880.4 , HORVU2Hr1G092880.3 , HORVU2Hr1G092880.2 , HORVU2Hr1G090280.20 , HORVU2Hr1G090280.21 , HORVU2Hr1G090380.6 , HORVU6Hr1G045460.1 , HORVU2Hr1G090280.5 , HORVU6Hr1G059420.4 , HORVU6Hr1G059420.1 , HORVU6Hr1G059420.2 , HORVU6Hr1G059420.3 , HORVU2Hr1G090380.2 , HORVU2Hr1G090380.3 , HORVU2Hr1G090380.1 , HORVU2Hr1G090380.7 , HORVU2Hr1G090380.4 , HORVU2Hr1G090380.5 , HORVU2Hr1G090280.17 , HORVU2Hr1G090280.16 , HORVU2Hr1G090280.15 , HORVU2Hr1G090280.14 , HORVU2Hr1G090280.13 , HORVU2Hr1G090280.12 , HORVU2Hr1G090280.11 , HORVU2Hr1G090280.10 , HORVU2Hr1G090280.19 , HORVU2Hr1G090280.18 , HORVU2Hr1G090310.5 , HORVU2Hr1G090310.1 , HORVU2Hr1G090310.3 , HORVU2Hr1G090310.2 , HORVU2Hr1G090310.4
Wheat TraesCS6B02G283900 , TraesCS6D02G214100 , TraesCS6A02G220900 , TraesCS2A02G390800 , TraesCS6B02G283900 , TraesCS2B02G408500 , TraesCS2D02G373800 , TraesCS2B02G393600 , TraesCS2D02G554800 , TraesCS6D02G223000 , TraesCS2D02G387800 , TraesCS2D02G387800 , TraesCS2A02G553300 , TraesCS6D02G214300 , TraesCS6B02G262400 , TraesCS2A02G376700 , TraesCS2B02G585300 , TraesCS6A02G221100 , TraesCS2D02G374000 , TraesCS2B02G394500 , TraesCS2A02G427400 , TraesCS2A02G377600 , TraesCS2B02G394400 , TraesCS2D02G373100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G038200 deoxyribonuclease tatD, putative, expressed K03424: TatD DNase family protein
2 Sobic.004G165600 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.010G150000 - -
4 Sobic.004G342600 cytidylyltransferase domain containing protein, expressed K06210: nicotinamide mononucleotide adenylyltransferase
5 Sobic.010G219700 fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
6 Sobic.006G142700 expressed protein -
7 Sobic.001G124500 elongation of fatty acids protein 2, putative, expressed -
8 Sobic.001G345366 - -
9 Sobic.004G200000 expressed protein -
10 Sobic.001G494400 DUF593 domain containing protein, expressed -
11 Sobic.004G047001 - -
12 Sobic.002G013600 expressed protein -
13 Sobic.007G099300 - -
14 Sobic.009G082500 - -
15 Sobic.005G096201 - -
16 Sobic.001G018550 - -
17 Sobic.002G231400 - -
18 Sobic.003G043650 - -
19 Sobic.003G194900 expressed protein -
20 Sobic.002G209450 - -


Gene co-expression network
sample Sobic006G152900 Sobic006G152900 Sobic002G038200 Sobic002G038200 Sobic006G152900--Sobic002G038200 Sobic004G165600 Sobic004G165600 Sobic006G152900--Sobic004G165600 Sobic010G150000 Sobic010G150000 Sobic006G152900--Sobic010G150000 Sobic004G342600 Sobic004G342600 Sobic006G152900--Sobic004G342600 Sobic010G219700 Sobic010G219700 Sobic006G152900--Sobic010G219700 Sobic006G142700 Sobic006G142700 Sobic006G152900--Sobic006G142700 Sobic001G124500 Sobic001G124500 Sobic006G152900--Sobic001G124500 Sobic001G345366 Sobic001G345366 Sobic006G152900--Sobic001G345366 Sobic004G200000 Sobic004G200000 Sobic006G152900--Sobic004G200000 Sobic002G038200--Sobic006G152900 Sobic009G250000 Sobic009G250000 Sobic002G038200--Sobic009G250000 Sobic002G038200--Sobic004G342600 Sobic009G082500 Sobic009G082500 Sobic002G038200--Sobic009G082500 Sobic002G038200--Sobic006G142700 Sobic002G038200--Sobic010G150000 Sobic002G038200--Sobic004G165600 Sobic001G494400 Sobic001G494400 Sobic002G038200--Sobic001G494400 Sobic002G282000 Sobic002G282000 Sobic002G038200--Sobic002G282000 Sobic004G165600--Sobic004G342600 Sobic004G165600--Sobic006G152900 Sobic002G013600 Sobic002G013600 Sobic004G165600--Sobic002G013600 Sobic004G165600--Sobic010G150000 Sobic005G096201 Sobic005G096201 Sobic004G165600--Sobic005G096201 Sobic004G053600 Sobic004G053600 Sobic004G165600--Sobic004G053600 Sobic004G165600--Sobic002G038200 Sobic007G046600 Sobic007G046600 Sobic004G165600--Sobic007G046600 Sobic004G165600--Sobic001G494400 Sobic010G150000--Sobic006G152900 Sobic010G150000--Sobic004G165600 Sobic010G150000--Sobic005G096201 Sobic010G150000--Sobic004G342600 Sobic002G209450 Sobic002G209450 Sobic010G150000--Sobic002G209450 Sobic010G150000--Sobic002G038200 Sobic009G215350 Sobic009G215350 Sobic010G150000--Sobic009G215350 Sobic007G099300 Sobic007G099300 Sobic010G150000--Sobic007G099300 Sobic003G429600 Sobic003G429600 Sobic010G150000--Sobic003G429600 Sobic004G342600--Sobic004G165600 Sobic004G342600--Sobic002G038200 Sobic004G342600--Sobic006G152900 Sobic004G342600--Sobic010G150000 Sobic004G342600--Sobic001G124500 Sobic004G342600--Sobic002G013600 Sobic004G342600--Sobic010G219700 Sobic004G342600--Sobic006G142700 Sobic008G013700 Sobic008G013700 Sobic004G342600--Sobic008G013700 Sobic010G219700--Sobic006G152900 Sobic010G219700--Sobic006G142700 Sobic010G219700--Sobic004G165600 Sobic010G219700--Sobic010G150000 Sobic010G219700--Sobic004G342600 Sobic010G219700--Sobic002G038200 Sobic002G413700 Sobic002G413700 Sobic010G219700--Sobic002G413700 Sobic010G219700--Sobic004G200000 Sobic001G156401 Sobic001G156401 Sobic010G219700--Sobic001G156401 Sobic006G142700--Sobic001G124500 Sobic006G142700--Sobic007G099300 Sobic006G142700--Sobic006G152900 Sobic006G142700--Sobic009G250000 Sobic006G142700--Sobic002G038200 Sobic006G142700--Sobic010G219700 Sobic003G194900 Sobic003G194900 Sobic006G142700--Sobic003G194900 Sobic006G142700--Sobic010G150000 Sobic004G019700 Sobic004G019700 Sobic006G142700--Sobic004G019700 Sobic001G124500--Sobic007G099300 Sobic001G124500--Sobic008G013700 Sobic001G124500--Sobic004G019700 Sobic001G124500--Sobic006G142700 Sobic004G192001 Sobic004G192001 Sobic001G124500--Sobic004G192001 Sobic004G125600 Sobic004G125600 Sobic001G124500--Sobic004G125600 Sobic004G125701 Sobic004G125701 Sobic001G124500--Sobic004G125701 Sobic010G178700 Sobic010G178700 Sobic001G124500--Sobic010G178700 Sobic001G124500--Sobic004G342600 Sobic001G345366--Sobic004G200000 Sobic007G016300 Sobic007G016300 Sobic001G345366--Sobic007G016300 Sobic001G345366--Sobic006G152900 Sobic001G345366--Sobic009G082500 Sobic003G043650 Sobic003G043650 Sobic001G345366--Sobic003G043650 Sobic002G331200 Sobic002G331200 Sobic001G345366--Sobic002G331200 Sobic005G083866 Sobic005G083866 Sobic001G345366--Sobic005G083866 Sobic006G201450 Sobic006G201450 Sobic001G345366--Sobic006G201450 Sobic002G030001 Sobic002G030001 Sobic001G345366--Sobic002G030001 Sobic004G200000--Sobic003G043650 Sobic004G200000--Sobic007G016300 Sobic004G200000--Sobic005G083866 Sobic004G200000--Sobic002G331200 Sobic004G200000--Sobic009G082500 Sobic004G047001 Sobic004G047001 Sobic004G200000--Sobic004G047001 Sobic001G018550 Sobic001G018550 Sobic004G200000--Sobic001G018550 Sobic001G214400 Sobic001G214400 Sobic004G200000--Sobic001G214400 Sobic002G231400 Sobic002G231400 Sobic004G200000--Sobic002G231400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.