Gene annotation
Transcriptome id Sobic.001G010900.1
Synonym CXIP1, ATGRXCP, Sb01g001070
Functional annotation OsGrx_S14 - glutaredoxin subgroup II, expressed
UniProt C5WSV3
Pfam PF00462
Panther DB PTHR10293:SF37 PTHR10293
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K07390; grxD, monothiol glutaredoxin
Gene Ontology GO:0009055; electron transfer activity GO:0015035protein disulfide oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G54900 : CAX interacting protein 1
RAP-DB (Rice) LOC_Os03g63420.1 : OsGrx_S14 - glutaredoxin subgroup II, expressed
MaizeGDB (Corn) Zm00025a009038 , Zm00025a016325
Brachypodium KQK12089
Barley HORVU5Hr1G122340.3 , HORVU5Hr1G122340.2 , HORVU5Hr1G122340.1
Wheat TraesCS5B02G545100 , TraesCS5D02G542400 , TraesCS4A02G330300
Populus -


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cDNA sequences
Sobic.001G010900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G298000 - -
2 Sobic.001G494400 DUF593 domain containing protein, expressed -
3 Sobic.007G046600 - -
4 Sobic.004G165600 glycosyl hydrolases family 17, putative, expressed -
5 Sobic.002G013600 expressed protein -
6 Sobic.010G261500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
7 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
8 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
9 Sobic.004G144300 - -
10 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
11 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
12 Sobic.002G209450 - -
13 Sobic.004G053600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@urease accessory protein F, putative, expressed K03188: urease accessory protein
14 Sobic.003G365200 expressed protein -
15 Sobic.003G139100 - -
16 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
17 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
19 Sobic.001G071700 protein kinase family protein, putative, expressed -
20 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic001G010900 Sobic001G010900 Sobic003G298000 Sobic003G298000 Sobic001G010900--Sobic003G298000 Sobic001G494400 Sobic001G494400 Sobic001G010900--Sobic001G494400 Sobic007G046600 Sobic007G046600 Sobic001G010900--Sobic007G046600 Sobic004G165600 Sobic004G165600 Sobic001G010900--Sobic004G165600 Sobic002G013600 Sobic002G013600 Sobic001G010900--Sobic002G013600 Sobic010G261500 Sobic010G261500 Sobic001G010900--Sobic010G261500 Sobic004G314100 Sobic004G314100 Sobic001G010900--Sobic004G314100 Sobic001G096200 Sobic001G096200 Sobic001G010900--Sobic001G096200 Sobic004G144300 Sobic004G144300 Sobic001G010900--Sobic004G144300 Sobic009G252500 Sobic009G252500 Sobic003G298000--Sobic009G252500 Sobic003G298000--Sobic001G494400 Sobic003G298000--Sobic007G046600 Sobic002G209450 Sobic002G209450 Sobic003G298000--Sobic002G209450 Sobic003G298000--Sobic001G010900 Sobic009G049100 Sobic009G049100 Sobic003G298000--Sobic009G049100 Sobic003G298000--Sobic004G144300 Sobic004G310400 Sobic004G310400 Sobic003G298000--Sobic004G310400 Sobic001G520000 Sobic001G520000 Sobic003G298000--Sobic001G520000 Sobic001G494400--Sobic003G298000 Sobic003G139100 Sobic003G139100 Sobic001G494400--Sobic003G139100 Sobic001G494400--Sobic002G013600 Sobic001G494400--Sobic002G209450 Sobic005G096201 Sobic005G096201 Sobic001G494400--Sobic005G096201 Sobic001G494400--Sobic001G010900 Sobic002G038200 Sobic002G038200 Sobic001G494400--Sobic002G038200 Sobic007G061500 Sobic007G061500 Sobic001G494400--Sobic007G061500 Sobic001G341900 Sobic001G341900 Sobic001G494400--Sobic001G341900 Sobic007G046600--Sobic009G252500 Sobic007G046600--Sobic003G298000 Sobic007G046600--Sobic002G209450 Sobic003G241600 Sobic003G241600 Sobic007G046600--Sobic003G241600 Sobic008G170800 Sobic008G170800 Sobic007G046600--Sobic008G170800 Sobic004G053600 Sobic004G053600 Sobic007G046600--Sobic004G053600 Sobic003G155000 Sobic003G155000 Sobic007G046600--Sobic003G155000 Sobic004G190800 Sobic004G190800 Sobic007G046600--Sobic004G190800 Sobic007G046600--Sobic001G010900 Sobic004G342600 Sobic004G342600 Sobic004G165600--Sobic004G342600 Sobic006G152900 Sobic006G152900 Sobic004G165600--Sobic006G152900 Sobic004G165600--Sobic002G013600 Sobic010G150000 Sobic010G150000 Sobic004G165600--Sobic010G150000 Sobic004G165600--Sobic005G096201 Sobic004G165600--Sobic004G053600 Sobic004G165600--Sobic002G038200 Sobic004G165600--Sobic007G046600 Sobic004G165600--Sobic001G494400 Sobic002G013600--Sobic004G190800 Sobic004G224100 Sobic004G224100 Sobic002G013600--Sobic004G224100 Sobic002G013600--Sobic005G096201 Sobic002G013600--Sobic003G139100 Sobic002G013600--Sobic004G165600 Sobic002G013600--Sobic001G494400 Sobic002G013600--Sobic007G061500 Sobic002G346250 Sobic002G346250 Sobic002G013600--Sobic002G346250 Sobic002G013600--Sobic003G241600 Sobic010G261500--Sobic009G252500 Sobic010G261500--Sobic007G046600 Sobic001G350800 Sobic001G350800 Sobic010G261500--Sobic001G350800 Sobic009G252600 Sobic009G252600 Sobic010G261500--Sobic009G252600 Sobic010G261500--Sobic004G314100 Sobic010G261500--Sobic004G190800 Sobic010G261500--Sobic004G053600 Sobic010G261500--Sobic001G010900 Sobic010G261500--Sobic003G298000 Sobic004G314100--Sobic007G061500 Sobic003G106100 Sobic003G106100 Sobic004G314100--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G314100--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G314100--Sobic001G028500 Sobic004G026000 Sobic004G026000 Sobic004G314100--Sobic004G026000 Sobic007G213500 Sobic007G213500 Sobic004G314100--Sobic007G213500 Sobic004G314100--Sobic004G310400 Sobic001G104100 Sobic001G104100 Sobic004G314100--Sobic001G104100 Sobic007G017300 Sobic007G017300 Sobic004G314100--Sobic007G017300 Sobic001G096200--Sobic004G310400 Sobic001G096200--Sobic004G026000 Sobic001G096200--Sobic001G520000 Sobic001G096200--Sobic004G314100 Sobic003G155800 Sobic003G155800 Sobic001G096200--Sobic003G155800 Sobic006G243000 Sobic006G243000 Sobic001G096200--Sobic006G243000 Sobic003G118500 Sobic003G118500 Sobic001G096200--Sobic003G118500 Sobic003G253700 Sobic003G253700 Sobic001G096200--Sobic003G253700 Sobic001G096200--Sobic004G231501 Sobic004G144300--Sobic004G310400 Sobic003G362800 Sobic003G362800 Sobic004G144300--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic004G144300--Sobic001G520000 Sobic002G085600 Sobic002G085600 Sobic004G144300--Sobic002G085600 Sobic004G144300--Sobic003G118500 Sobic004G144300--Sobic009G049100 Sobic004G144300--Sobic001G096200
Octagon: transcription factors


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