Gene annotation
Transcriptome id Sobic.004G314100.2
Synonym Sb04g034600
Functional annotation GS9(Ortholog in rice:Zhao et al.(2018)) (PubMedID : 31659890)
expressed protein
UniProt A0A194YTL5
Pfam -
Panther DB PTHR33385 PTHR33385:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14630 : -
RAP-DB (Rice) LOC_Os02g53280.1 : expressed protein
MaizeGDB (Corn) Zm00025a033056 , Zm00025a022277
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
2 Sobic.003G106100 expressed protein -
3 Sobic.004G231501 - -
4 Sobic.001G028500 expressed protein -
5 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
6 Sobic.007G213500 expressed protein -
7 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
8 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
9 Sobic.007G017300 endoglucanase, putative, expressed -
10 Sobic.003G093500 protein binding protein, putative, expressed -
11 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
12 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
13 Sobic.009G004500 expressed protein -
14 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
15 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
16 Sobic.004G202750 - -
17 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
18 Sobic.005G155001 - -
19 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
20 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11


Gene co-expression network
sample Sobic004G314100 Sobic004G314100 Sobic007G061500 Sobic007G061500 Sobic004G314100--Sobic007G061500 Sobic003G106100 Sobic003G106100 Sobic004G314100--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G314100--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G314100--Sobic001G028500 Sobic004G026000 Sobic004G026000 Sobic004G314100--Sobic004G026000 Sobic007G213500 Sobic007G213500 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic001G104100 Sobic001G104100 Sobic004G314100--Sobic001G104100 Sobic007G017300 Sobic007G017300 Sobic004G314100--Sobic007G017300 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic009G004500 Sobic009G004500 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic001G368000 Sobic001G368000 Sobic007G061500--Sobic001G368000 Sobic003G093500 Sobic003G093500 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic001G483200 Sobic001G483200 Sobic007G061500--Sobic001G483200 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic003G106100--Sobic001G104100 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic003G106100--Sobic001G060200 Sobic003G106100--Sobic004G026000 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic004G231501--Sobic009G004500 Sobic004G231501--Sobic007G017300 Sobic004G202750 Sobic004G202750 Sobic004G231501--Sobic004G202750 Sobic004G231501--Sobic001G483200 Sobic004G231501--Sobic001G368000 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G028500--Sobic001G060200 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic001G096200 Sobic001G096200 Sobic004G026000--Sobic001G096200 Sobic006G121200 Sobic006G121200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G026000--Sobic004G231501 Sobic004G026000--Sobic001G028500 Sobic007G213500--Sobic004G026000 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic007G213500--Sobic003G106100 Sobic007G213500--Sobic007G061500 Sobic007G213500--Sobic001G104100 Sobic004G310400--Sobic004G026000 Sobic004G144300 Sobic004G144300 Sobic004G310400--Sobic004G144300 Sobic004G310400--Sobic001G096200 Sobic004G310400--Sobic004G314100 Sobic003G118500 Sobic003G118500 Sobic004G310400--Sobic003G118500 Sobic004G310400--Sobic001G104100 Sobic004G310400--Sobic006G121200 Sobic004G310400--Sobic007G213500 Sobic008G160100 Sobic008G160100 Sobic004G310400--Sobic008G160100 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic001G104100--Sobic007G213500 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic005G155001 Sobic005G155001 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic007G017300--Sobic001G468200
Octagon: transcription factors


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