Gene annotation
Transcriptome id Sobic.005G155001.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIU9
Pfam -
Panther DB PTHR36081 PTHR36081:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66090 : -
RAP-DB (Rice) LOC_Os09g36990.1 : expressed protein
MaizeGDB (Corn) Zm00025a049298
Brachypodium -
Barley HORVU3Hr1G097030.1 , HORVU5Hr1G084440.5 , HORVU5Hr1G084440.4 , HORVU5Hr1G084440.3 , HORVU5Hr1G084440.2 , HORVU5Hr1G084440.1 , HORVU2Hr1G079400.1 , HORVU3Hr1G097030.2 , HORVU1Hr1G008440.2 , HORVU1Hr1G008440.1 , HORVU5Hr1G079170.1
Wheat TraesCS5B02G334100 , TraesCS5D02G339400 , TraesCS5A02G334600 , TraesCS5D02G339400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
2 Sobic.009G114900 - -
3 Sobic.009G004500 expressed protein -
4 Sobic.007G017300 endoglucanase, putative, expressed -
5 Sobic.010G021401 - -
6 Sobic.001G527900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
7 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
8 Sobic.008G185000 - -
9 Sobic.007G090406 - -
10 Sobic.003G093500 protein binding protein, putative, expressed -
11 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
13 Sobic.006G093400 potassium channel SKOR, putative, expressed -
14 Sobic.001G060200 - -
15 Sobic.002G252700 vignain precursor, putative, expressed -
16 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
17 Sobic.001G028500 expressed protein -
18 Sobic.007G213500 expressed protein -
19 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
20 Sobic.002G360701 - -


Gene co-expression network
sample Sobic005G155001 Sobic005G155001 Sobic001G483200 Sobic001G483200 Sobic005G155001--Sobic001G483200 Sobic009G114900 Sobic009G114900 Sobic005G155001--Sobic009G114900 Sobic009G004500 Sobic009G004500 Sobic005G155001--Sobic009G004500 Sobic007G017300 Sobic007G017300 Sobic005G155001--Sobic007G017300 Sobic010G021401 Sobic010G021401 Sobic005G155001--Sobic010G021401 Sobic001G527900 Sobic001G527900 Sobic005G155001--Sobic001G527900 Sobic001G368000 Sobic001G368000 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic007G090406 Sobic007G090406 Sobic005G155001--Sobic007G090406 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic007G061500 Sobic007G061500 Sobic001G483200--Sobic007G061500 Sobic007G213500 Sobic007G213500 Sobic001G483200--Sobic007G213500 Sobic001G483200--Sobic001G527900 Sobic001G028500 Sobic001G028500 Sobic001G483200--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic001G483200--Sobic001G468200 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic006G093400 Sobic006G093400 Sobic009G114900--Sobic006G093400 Sobic008G192800 Sobic008G192800 Sobic009G114900--Sobic008G192800 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic003G093500 Sobic003G093500 Sobic009G004500--Sobic003G093500 Sobic009G004500--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic009G004500--Sobic001G060200 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic010G021401--Sobic001G483200 Sobic010G021401--Sobic001G527900 Sobic010G021401--Sobic007G090406 Sobic010G021401--Sobic002G252700 Sobic010G021401--Sobic008G185000 Sobic010G021401--Sobic008G192800 Sobic001G527900--Sobic005G155001 Sobic001G527900--Sobic001G483200 Sobic001G527900--Sobic009G114900 Sobic002G314950 Sobic002G314950 Sobic001G527900--Sobic002G314950 Sobic001G527900--Sobic009G004500 Sobic001G527900--Sobic010G021401 Sobic001G527900--Sobic001G060200 Sobic001G527900--Sobic007G017300 Sobic001G527900--Sobic007G090406 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic008G185000--Sobic005G155001 Sobic008G185000--Sobic009G004500 Sobic008G185000--Sobic001G483200 Sobic008G185000--Sobic001G490600 Sobic008G185000--Sobic010G021401 Sobic008G185000--Sobic001G368000 Sobic008G185000--Sobic007G017300 Sobic008G185000--Sobic009G114900 Sobic008G185000--Sobic002G252700 Sobic007G090406--Sobic008G192800 Sobic007G090406--Sobic009G114900 Sobic007G090406--Sobic005G155001 Sobic001G176800 Sobic001G176800 Sobic007G090406--Sobic001G176800 Sobic007G090406--Sobic009G004500 Sobic007G090406--Sobic010G021401 Sobic006G280900 Sobic006G280900 Sobic007G090406--Sobic006G280900 Sobic009G083100 Sobic009G083100 Sobic007G090406--Sobic009G083100 Sobic004G184500 Sobic004G184500 Sobic007G090406--Sobic004G184500
Octagon: transcription factors


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