Gene annotation
Transcriptome id Sobic.001G028500.2,Sobic.001G028500.1
Synonym Sb01g002690, ATSPX4, SPX4
Functional annotation expressed protein
UniProt A0A1Z5S4E8 , C5WU34
Pfam PF03105
Panther DB PTHR10783
NCBI CDD KOG1161; Protein involved in vacuolar polyphosphate accumulation, contains SPX domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15330 : SPX domain gene 4
RAP-DB (Rice) LOC_Os03g61200.1 : expressed protein
MaizeGDB (Corn) Zm00025a008885
Brachypodium KQK12353
Barley HORVU6Hr1G019180.3 , HORVU6Hr1G019180.2 , HORVU6Hr1G019180.1 , HORVU4Hr1G068390.3 , HORVU5Hr1G115510.1 , HORVU5Hr1G115510.2 , HORVU5Hr1G115510.3
Wheat TraesCS5B02G505400 , TraesCS5D02G506200 , TraesCS5D02G506200 , TraesCS4A02G367200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G231501 - -
2 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
3 Sobic.009G004500 expressed protein -
4 Sobic.003G106100 expressed protein -
5 Sobic.004G202750 - -
6 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
7 Sobic.007G017300 endoglucanase, putative, expressed -
8 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
9 Sobic.001G060200 - -
10 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
11 Sobic.003G093500 protein binding protein, putative, expressed -
12 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
13 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
14 Sobic.005G155001 - -
15 Sobic.007G213500 expressed protein -
16 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
17 Sobic.001G350800 - -
18 Sobic.004G350600 AMP-binding domain containing protein, expressed -
19 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.002G320700 expressed protein -


Gene co-expression network
sample Sobic001G028500 Sobic001G028500 Sobic004G231501 Sobic004G231501 Sobic001G028500--Sobic004G231501 Sobic007G061500 Sobic007G061500 Sobic001G028500--Sobic007G061500 Sobic009G004500 Sobic009G004500 Sobic001G028500--Sobic009G004500 Sobic003G106100 Sobic003G106100 Sobic001G028500--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic001G028500--Sobic004G202750 Sobic004G314100 Sobic004G314100 Sobic001G028500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic001G028500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic001G028500--Sobic001G483200 Sobic001G060200 Sobic001G060200 Sobic001G028500--Sobic001G060200 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic004G231501--Sobic009G004500 Sobic004G231501--Sobic007G017300 Sobic004G231501--Sobic004G202750 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic003G093500 Sobic003G093500 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic010G021401 Sobic010G021401 Sobic009G004500--Sobic010G021401 Sobic009G004500--Sobic001G060200 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic003G106100--Sobic001G104100 Sobic007G213500 Sobic007G213500 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic003G106100--Sobic004G026000 Sobic004G202750--Sobic001G028500 Sobic001G350800 Sobic001G350800 Sobic004G202750--Sobic001G350800 Sobic002G320700 Sobic002G320700 Sobic004G202750--Sobic002G320700 Sobic004G202750--Sobic009G004500 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic004G202750--Sobic001G483200 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic007G017300--Sobic001G468200 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G527900 Sobic001G527900 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic001G060200--Sobic009G004500 Sobic001G060200--Sobic001G028500 Sobic001G060200--Sobic003G093500 Sobic001G060200--Sobic007G061500 Sobic001G060200--Sobic005G155001 Sobic001G060200--Sobic003G106100 Sobic001G060200--Sobic001G527900 Sobic001G060200--Sobic007G017300 Sobic004G224100 Sobic004G224100 Sobic001G060200--Sobic004G224100
Octagon: transcription factors


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