Gene annotation
Transcriptome id Sobic.001G060200.1
Synonym
Functional annotation -
UniProt A0A1B6QHJ6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G004500 expressed protein -
2 Sobic.001G028500 expressed protein -
3 Sobic.003G093500 protein binding protein, putative, expressed -
4 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
5 Sobic.005G155001 - -
6 Sobic.003G106100 expressed protein -
7 Sobic.001G527900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
8 Sobic.007G017300 endoglucanase, putative, expressed -
9 Sobic.004G224100 RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
10 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.010G021401 - -
12 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
13 Sobic.007G090406 - -
14 Sobic.004G231501 - -
15 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
16 Sobic.009G114900 - -
17 Sobic.002G013600 expressed protein -
18 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
19 Sobic.004G337700 expressed protein -
20 Sobic.004G202750 - -


Gene co-expression network
sample Sobic001G060200 Sobic001G060200 Sobic009G004500 Sobic009G004500 Sobic001G060200--Sobic009G004500 Sobic001G028500 Sobic001G028500 Sobic001G060200--Sobic001G028500 Sobic003G093500 Sobic003G093500 Sobic001G060200--Sobic003G093500 Sobic007G061500 Sobic007G061500 Sobic001G060200--Sobic007G061500 Sobic005G155001 Sobic005G155001 Sobic001G060200--Sobic005G155001 Sobic003G106100 Sobic003G106100 Sobic001G060200--Sobic003G106100 Sobic001G527900 Sobic001G527900 Sobic001G060200--Sobic001G527900 Sobic007G017300 Sobic007G017300 Sobic001G060200--Sobic007G017300 Sobic004G224100 Sobic004G224100 Sobic001G060200--Sobic004G224100 Sobic009G004500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic001G368000 Sobic001G368000 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic010G021401 Sobic010G021401 Sobic009G004500--Sobic010G021401 Sobic009G004500--Sobic001G060200 Sobic004G231501 Sobic004G231501 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic001G028500--Sobic004G202750 Sobic004G314100 Sobic004G314100 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G028500--Sobic001G060200 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic003G093500--Sobic007G017300 Sobic001G341900 Sobic001G341900 Sobic003G093500--Sobic001G341900 Sobic008G192800 Sobic008G192800 Sobic003G093500--Sobic008G192800 Sobic009G045100 Sobic009G045100 Sobic003G093500--Sobic009G045100 Sobic003G093500--Sobic005G155001 Sobic003G093500--Sobic004G224100 Sobic003G093500--Sobic001G060200 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic005G155001--Sobic001G483200 Sobic009G114900 Sobic009G114900 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic007G090406 Sobic007G090406 Sobic005G155001--Sobic007G090406 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic003G106100--Sobic001G104100 Sobic007G213500 Sobic007G213500 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic003G106100--Sobic004G026000 Sobic001G527900--Sobic005G155001 Sobic001G527900--Sobic001G483200 Sobic001G527900--Sobic009G114900 Sobic002G314950 Sobic002G314950 Sobic001G527900--Sobic002G314950 Sobic001G527900--Sobic009G004500 Sobic001G527900--Sobic010G021401 Sobic001G527900--Sobic001G060200 Sobic001G527900--Sobic007G017300 Sobic001G527900--Sobic007G090406 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic007G017300--Sobic001G468200 Sobic005G096201 Sobic005G096201 Sobic004G224100--Sobic005G096201 Sobic002G013600 Sobic002G013600 Sobic004G224100--Sobic002G013600 Sobic004G224100--Sobic003G093500 Sobic003G139100 Sobic003G139100 Sobic004G224100--Sobic003G139100 Sobic004G224100--Sobic001G341900 Sobic004G224100--Sobic001G060200 Sobic004G047001 Sobic004G047001 Sobic004G224100--Sobic004G047001 Sobic004G224100--Sobic008G192800 Sobic004G224100--Sobic007G061500
Octagon: transcription factors


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