Gene annotation
Transcriptome id Sobic.001G527900.2,Sobic.001G527900.1
Synonym Sb01g049120
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nascent polypeptide-associated complex subunit alpha, putative, expressed
UniProt A0A1Z5SBQ5 , C5X0W9
Pfam PF01849
Panther DB PTHR21713 PTHR21713:SF7
NCBI CDD KOG2239; Transcription factor containing NAC and TS-N domains
KEGG Orthology K03626; EGD2, nascent polypeptide-associated complex subunit alpha
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49470 : nascent polypeptide-associated complex subunit alpha-like protein 2
RAP-DB (Rice) LOC_Os03g02960.1 : nascent polypeptide-associated complex subunit alpha, putative, expressed
MaizeGDB (Corn) Zm00025a053506
Brachypodium KQK23927
Barley HORVU4Hr1G084900.3 , HORVU4Hr1G084900.2 , HORVU4Hr1G084900.1
Wheat TraesCS4B02G347400 , TraesCS5A02G516100 , TraesCS4D02G342400 , TraesCS3B02G518200
Populus -


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cDNA sequences
Sobic.001G527900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G155001 - -
2 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
3 Sobic.009G114900 - -
4 Sobic.002G314950 - -
5 Sobic.009G004500 expressed protein -
6 Sobic.010G021401 - -
7 Sobic.001G060200 - -
8 Sobic.007G017300 endoglucanase, putative, expressed -
9 Sobic.007G090406 - -
10 Sobic.001G361750 - -
11 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
13 Sobic.003G106100 expressed protein -
14 Sobic.006G093400 potassium channel SKOR, putative, expressed -
15 Sobic.009G004300 ECT protein, putative, expressed -
16 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
17 Sobic.001G176800 - -
18 Sobic.006G232300 cytochrome P450 72A1, putative, expressed -
19 Sobic.001G028500 expressed protein -
20 Sobic.003G093500 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G527900 Sobic001G527900 Sobic005G155001 Sobic005G155001 Sobic001G527900--Sobic005G155001 Sobic001G483200 Sobic001G483200 Sobic001G527900--Sobic001G483200 Sobic009G114900 Sobic009G114900 Sobic001G527900--Sobic009G114900 Sobic002G314950 Sobic002G314950 Sobic001G527900--Sobic002G314950 Sobic009G004500 Sobic009G004500 Sobic001G527900--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic001G527900--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic001G527900--Sobic001G060200 Sobic007G017300 Sobic007G017300 Sobic001G527900--Sobic007G017300 Sobic007G090406 Sobic007G090406 Sobic001G527900--Sobic007G090406 Sobic005G155001--Sobic001G483200 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic001G368000 Sobic001G368000 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic005G155001--Sobic007G090406 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic007G061500 Sobic007G061500 Sobic001G483200--Sobic007G061500 Sobic007G213500 Sobic007G213500 Sobic001G483200--Sobic007G213500 Sobic001G483200--Sobic001G527900 Sobic001G028500 Sobic001G028500 Sobic001G483200--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic001G483200--Sobic001G468200 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic006G093400 Sobic006G093400 Sobic009G114900--Sobic006G093400 Sobic008G192800 Sobic008G192800 Sobic009G114900--Sobic008G192800 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic002G314950--Sobic001G483200 Sobic002G314950--Sobic006G093400 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic007G200200 Sobic007G200200 Sobic002G314950--Sobic007G200200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic003G093500 Sobic003G093500 Sobic009G004500--Sobic003G093500 Sobic009G004500--Sobic010G021401 Sobic009G004500--Sobic001G060200 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic010G021401--Sobic001G483200 Sobic010G021401--Sobic001G527900 Sobic010G021401--Sobic007G090406 Sobic010G021401--Sobic002G252700 Sobic010G021401--Sobic008G185000 Sobic010G021401--Sobic008G192800 Sobic001G060200--Sobic009G004500 Sobic001G060200--Sobic001G028500 Sobic001G060200--Sobic003G093500 Sobic001G060200--Sobic007G061500 Sobic001G060200--Sobic005G155001 Sobic003G106100 Sobic003G106100 Sobic001G060200--Sobic003G106100 Sobic001G060200--Sobic001G527900 Sobic001G060200--Sobic007G017300 Sobic004G224100 Sobic004G224100 Sobic001G060200--Sobic004G224100 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic007G090406--Sobic008G192800 Sobic007G090406--Sobic009G114900 Sobic007G090406--Sobic005G155001 Sobic001G176800 Sobic001G176800 Sobic007G090406--Sobic001G176800 Sobic007G090406--Sobic009G004500 Sobic007G090406--Sobic010G021401 Sobic006G280900 Sobic006G280900 Sobic007G090406--Sobic006G280900 Sobic009G083100 Sobic009G083100 Sobic007G090406--Sobic009G083100 Sobic004G184500 Sobic004G184500 Sobic007G090406--Sobic004G184500
Octagon: transcription factors


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