Gene annotation
Transcriptome id Sobic.008G192800.2,Sobic.008G192800.5,Sobic.008G192800.4,Sobic.008G192800.6,Sobic.008G192800.1,Sobic.008G192800.3
Synonym Sb08g023280
Functional annotation CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed
UniProt A0A1Z5R8M5 , A0A1B6PEN1 , A0A1Z5R7K0
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF146 PTHR11909:SF146 PTHR11909
NCBI CDD KOG1164; Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G13670 : Protein kinase family protein
RAP-DB (Rice) LOC_Os05g11140.2,LOC_Os01g54100.1 : CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed,CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a025053 , Zm00025a022749
Brachypodium KQJ85564 , KQK07093
Barley HORVU5Hr1G000060.11 , HORVU5Hr1G000060.10 , HORVU5Hr1G000060.12 , HORVU1Hr1G028450.14 , HORVU1Hr1G028450.17 , HORVU1Hr1G028450.10 , HORVU1Hr1G028450.15 , HORVU1Hr1G028450.16 , HORVU1Hr1G028450.11 , HORVU1Hr1G028450.12 , HORVU1Hr1G028450.13 , HORVU1Hr1G028450.18 , HORVU1Hr1G028450.19 , HORVU5Hr1G000060.5 , HORVU5Hr1G000060.4 , HORVU5Hr1G000060.7 , HORVU5Hr1G000060.6 , HORVU5Hr1G000060.1 , HORVU5Hr1G000060.3 , HORVU5Hr1G000060.2 , HORVU5Hr1G000060.9 , HORVU5Hr1G000060.8 , HORVU1Hr1G028450.21 , HORVU1Hr1G028450.20 , HORVU1Hr1G028450.22 , HORVU1Hr1G028450.8 , HORVU1Hr1G028450.9 , HORVU1Hr1G028450.6 , HORVU1Hr1G028450.4 , HORVU1Hr1G028450.5 , HORVU1Hr1G028450.2 , HORVU1Hr1G028450.3 , HORVU1Hr1G028450.1 , HORVU1Hr1G028450.7
Wheat TraesCS5D02G000900 , TraesCS5A02G000600 , TraesCS5A02G000600 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS5B02G000400 , TraesCS5B02G000400 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G090406 - -
2 Sobic.009G004500 expressed protein -
3 Sobic.003G093500 protein binding protein, putative, expressed -
4 Sobic.001G176800 - -
5 Sobic.009G114900 - -
6 Sobic.005G155001 - -
7 Sobic.007G017300 endoglucanase, putative, expressed -
8 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
9 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
10 Sobic.001G060200 - -
11 Sobic.010G021401 - -
12 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
13 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
14 Sobic.002G252700 vignain precursor, putative, expressed -
15 Sobic.004G224100 RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
16 Sobic.004G184500 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
17 Sobic.005G001600 IBR domain containing protein, expressed -
18 Sobic.001G341900 domain of unknown function domain containing protein, expressed -
19 Sobic.009G236000 GATA zinc finger domain containing protein, expressed -
20 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic008G192800 Sobic008G192800 Sobic007G090406 Sobic007G090406 Sobic008G192800--Sobic007G090406 Sobic009G004500 Sobic009G004500 Sobic008G192800--Sobic009G004500 Sobic003G093500 Sobic003G093500 Sobic008G192800--Sobic003G093500 Sobic001G176800 Sobic001G176800 Sobic008G192800--Sobic001G176800 Sobic009G114900 Sobic009G114900 Sobic008G192800--Sobic009G114900 Sobic005G155001 Sobic005G155001 Sobic008G192800--Sobic005G155001 Sobic007G017300 Sobic007G017300 Sobic008G192800--Sobic007G017300 Sobic007G061500 Sobic007G061500 Sobic008G192800--Sobic007G061500 Sobic001G368000 Sobic001G368000 Sobic008G192800--Sobic001G368000 Sobic007G090406--Sobic008G192800 Sobic007G090406--Sobic009G114900 Sobic007G090406--Sobic005G155001 Sobic007G090406--Sobic001G176800 Sobic007G090406--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic007G090406--Sobic010G021401 Sobic006G280900 Sobic006G280900 Sobic007G090406--Sobic006G280900 Sobic009G083100 Sobic009G083100 Sobic007G090406--Sobic009G083100 Sobic004G184500 Sobic004G184500 Sobic007G090406--Sobic004G184500 Sobic009G004500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic001G028500 Sobic001G028500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic009G004500--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic009G004500--Sobic001G060200 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic003G093500--Sobic007G017300 Sobic001G341900 Sobic001G341900 Sobic003G093500--Sobic001G341900 Sobic003G093500--Sobic008G192800 Sobic009G045100 Sobic009G045100 Sobic003G093500--Sobic009G045100 Sobic003G093500--Sobic005G155001 Sobic004G224100 Sobic004G224100 Sobic003G093500--Sobic004G224100 Sobic003G093500--Sobic001G060200 Sobic001G176800--Sobic004G184500 Sobic003G202900 Sobic003G202900 Sobic001G176800--Sobic003G202900 Sobic001G176800--Sobic008G192800 Sobic005G094500 Sobic005G094500 Sobic001G176800--Sobic005G094500 Sobic001G176800--Sobic007G017300 Sobic001G176800--Sobic009G045100 Sobic001G176800--Sobic007G090406 Sobic001G468200 Sobic001G468200 Sobic001G176800--Sobic001G468200 Sobic005G001600 Sobic005G001600 Sobic001G176800--Sobic005G001600 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic006G093400 Sobic006G093400 Sobic009G114900--Sobic006G093400 Sobic009G114900--Sobic008G192800 Sobic001G527900 Sobic001G527900 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200 Sobic005G155001--Sobic001G483200 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic005G155001--Sobic007G090406 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G213500 Sobic007G213500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic004G231501 Sobic004G231501 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic004G314100 Sobic004G314100 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic003G106100 Sobic003G106100 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500
Octagon: transcription factors


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