Gene annotation
Transcriptome id Sobic.007G017300.2,Sobic.007G017300.1
Synonym ATCEL2, CEL2, Sb07g001480
Functional annotation endoglucanase, putative, expressed
UniProt C5YM15 , A0A1Z5R7T1
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G02800 : cellulase 2
RAP-DB (Rice) LOC_Os08g02220.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a018483 , Zm00025a035938 , Zm00025a036077 , Zm00025a042715 , Zm00025a018779
Brachypodium KQJ98076 , KQJ98077 , KQJ98284 , KQJ83374 , KQK20451 , PNT64837
Barley HORVU6Hr1G077010.1 , HORVU6Hr1G077010.3 , HORVU6Hr1G077010.2 , HORVU6Hr1G077010.5 , HORVU6Hr1G077010.4 , HORVU6Hr1G077010.7 , HORVU6Hr1G077010.8 , HORVU2Hr1G077130.1 , HORVU1Hr1G015550.2 , HORVU6Hr1G077010.21 , HORVU6Hr1G077010.22 , HORVU6Hr1G077010.14 , HORVU6Hr1G077010.17 , HORVU6Hr1G077010.16 , HORVU6Hr1G077010.11 , HORVU6Hr1G077010.10 , HORVU6Hr1G077010.13 , HORVU6Hr1G077010.12 , HORVU6Hr1G077010.19 , HORVU6Hr1G077010.18 , HORVU6Hr1G022400.1 , HORVU1Hr1G079980.15 , HORVU1Hr1G079980.16 , HORVU1Hr1G079980.11 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU1Hr1G019520.6 , HORVU1Hr1G019520.4 , HORVU1Hr1G019520.5 , HORVU1Hr1G019520.2 , HORVU1Hr1G019520.3 , HORVU1Hr1G019520.1 , HORVU1Hr1G015550.1 , HORVU1Hr1G079980.9 , HORVU2Hr1G111880.1 , HORVU2Hr1G111880.2 , HORVU7Hr1G075970.1 , HORVU1Hr1G079980.8 , HORVU7Hr1G075970.2 , HORVU1Hr1G079980.6 , HORVU1Hr1G079980.7 , HORVU1Hr1G079980.4 , HORVU1Hr1G079980.5 , HORVU1Hr1G079980.2 , HORVU1Hr1G079980.3 , HORVU1Hr1G079980.1
Wheat TraesCS5A02G172200 , TraesCS5A02G172200 , TraesCS2A02G310200 , TraesCS6B02G342600 , TraesCS6D02G089200 , TraesCS7B02G219100 , TraesCS3D02G153400 , TraesCS1B02G107700 , TraesCS6A02G093200 , TraesCS2B02G327200 , TraesCS6D02G291800 , TraesCS1D02G074700 , TraesCS1D02G075100 , TraesCS1A02G360700 , TraesCS7D02G314400 , TraesCS5B02G169500 , TraesCS5B02G169600 , TraesCS1B02G377100 , TraesCS1A02G088700 , TraesCS3A02G144600 , TraesCS1A02G072100 , TraesCS2D02G308500 , TraesCS7A02G317700 , TraesCS1D02G074900 , TraesCS1B02G090700 , TraesCS1D02G090100 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS6A02G312400 , TraesCS6A02G312400 , TraesCS5A02G172100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
2 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
3 Sobic.009G004500 expressed protein -
4 Sobic.005G155001 - -
5 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
6 Sobic.003G093500 protein binding protein, putative, expressed -
7 Sobic.007G213500 expressed protein -
8 Sobic.001G028500 expressed protein -
9 Sobic.001G468200 MT-A70 domain containing protein, expressed -
10 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
11 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
12 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
13 Sobic.004G231501 - -
14 Sobic.005G094500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
15 Sobic.001G176800 - -
16 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
17 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
18 Sobic.003G155350 - -
19 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
20 Sobic.009G114900 - -


Gene co-expression network
sample Sobic007G017300 Sobic007G017300 Sobic001G368000 Sobic001G368000 Sobic007G017300--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic007G017300--Sobic001G483200 Sobic009G004500 Sobic009G004500 Sobic007G017300--Sobic009G004500 Sobic005G155001 Sobic005G155001 Sobic007G017300--Sobic005G155001 Sobic007G061500 Sobic007G061500 Sobic007G017300--Sobic007G061500 Sobic003G093500 Sobic003G093500 Sobic007G017300--Sobic003G093500 Sobic007G213500 Sobic007G213500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic007G017300--Sobic001G468200 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G527900 Sobic001G527900 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic010G021401 Sobic010G021401 Sobic009G004500--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic009G004500--Sobic001G060200 Sobic005G155001--Sobic001G483200 Sobic009G114900 Sobic009G114900 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic007G090406 Sobic007G090406 Sobic005G155001--Sobic007G090406 Sobic004G231501 Sobic004G231501 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic004G314100 Sobic004G314100 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic003G106100 Sobic003G106100 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic003G093500--Sobic007G017300 Sobic001G341900 Sobic001G341900 Sobic003G093500--Sobic001G341900 Sobic008G192800 Sobic008G192800 Sobic003G093500--Sobic008G192800 Sobic009G045100 Sobic009G045100 Sobic003G093500--Sobic009G045100 Sobic003G093500--Sobic005G155001 Sobic004G224100 Sobic004G224100 Sobic003G093500--Sobic004G224100 Sobic003G093500--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic007G213500--Sobic004G026000 Sobic006G121200 Sobic006G121200 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic007G213500--Sobic003G106100 Sobic007G213500--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic007G213500--Sobic001G104100 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G028500--Sobic001G060200 Sobic003G155350 Sobic003G155350 Sobic001G468200--Sobic003G155350 Sobic001G468200--Sobic007G017300 Sobic001G468200--Sobic001G483200 Sobic001G468200--Sobic001G368000 Sobic001G176800 Sobic001G176800 Sobic001G468200--Sobic001G176800 Sobic004G184500 Sobic004G184500 Sobic001G468200--Sobic004G184500 Sobic005G094500 Sobic005G094500 Sobic001G468200--Sobic005G094500 Sobic003G202900 Sobic003G202900 Sobic001G468200--Sobic003G202900 Sobic009G170301 Sobic009G170301 Sobic001G468200--Sobic009G170301
Octagon: transcription factors


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