Gene annotation
Transcriptome id Sobic.007G213500.1
Synonym Sb07g028065
Functional annotation expressed protein
UniProt A0A1B6PIZ8
Pfam -
Panther DB PTHR33698 PTHR33698:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g39320.1 : expressed protein
MaizeGDB (Corn) Zm00025a033783
Brachypodium -
Barley HORVU7Hr1G049890.1 , HORVU7Hr1G049890.3 , HORVU7Hr1G049890.2 , HORVU7Hr1G049890.5 , HORVU7Hr1G049890.4 , HORVU7Hr1G049890.7 , HORVU7Hr1G049890.6
Wheat TraesCS7B02G147800 , TraesCS7A02G243800 , TraesCS7D02G242400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
2 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
3 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
4 Sobic.007G017300 endoglucanase, putative, expressed -
5 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
6 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
7 Sobic.003G106100 expressed protein -
8 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
9 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
10 Sobic.001G028500 expressed protein -
11 Sobic.005G155001 - -
12 Sobic.004G231501 - -
13 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
14 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
15 Sobic.001G468200 MT-A70 domain containing protein, expressed -
16 Sobic.009G004500 expressed protein -
17 Sobic.006G232300 cytochrome P450 72A1, putative, expressed -
18 Sobic.002G360701 - -
19 Sobic.002G123700 - -
20 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T


Gene co-expression network
sample Sobic007G213500 Sobic007G213500 Sobic004G026000 Sobic004G026000 Sobic007G213500--Sobic004G026000 Sobic006G121200 Sobic006G121200 Sobic007G213500--Sobic006G121200 Sobic004G314100 Sobic004G314100 Sobic007G213500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic007G213500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic007G213500--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic007G213500--Sobic001G368000 Sobic003G106100 Sobic003G106100 Sobic007G213500--Sobic003G106100 Sobic007G061500 Sobic007G061500 Sobic007G213500--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic007G213500--Sobic001G104100 Sobic004G310400 Sobic004G310400 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic001G096200 Sobic001G096200 Sobic004G026000--Sobic001G096200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G026000--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G026000--Sobic001G028500 Sobic006G121200--Sobic007G213500 Sobic006G121200--Sobic004G026000 Sobic006G121200--Sobic004G314100 Sobic006G121200--Sobic004G310400 Sobic001G468200 Sobic001G468200 Sobic006G121200--Sobic001G468200 Sobic001G071700 Sobic001G071700 Sobic006G121200--Sobic001G071700 Sobic009G235100 Sobic009G235100 Sobic006G121200--Sobic009G235100 Sobic002G123700 Sobic002G123700 Sobic006G121200--Sobic002G123700 Sobic006G121200--Sobic007G061500 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic009G004500 Sobic009G004500 Sobic007G017300--Sobic009G004500 Sobic005G155001 Sobic005G155001 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic003G093500 Sobic003G093500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G527900 Sobic001G527900 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic003G106100--Sobic001G104100 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic003G106100--Sobic001G060200 Sobic003G106100--Sobic004G026000 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic003G118500 Sobic003G118500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic001G104100--Sobic007G213500
Octagon: transcription factors


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