Gene annotation
Transcriptome id Sobic.002G123700.1
Synonym
Functional annotation -
UniProt A0A1B6QAS4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
2 Sobic.007G213500 expressed protein -
3 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
4 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
5 Sobic.001G468200 MT-A70 domain containing protein, expressed -
6 Sobic.002G320700 expressed protein -
7 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
8 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
9 Sobic.009G235100 GTP-binding protein, putative, expressed K03595: era, GTPase
10 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
11 Sobic.006G232300 cytochrome P450 72A1, putative, expressed -
12 Sobic.007G017300 endoglucanase, putative, expressed -
13 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
14 Sobic.009G147600 pentatricopeptide, putative, expressed -
15 Sobic.003G030200 phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
16 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.004G231501 - -
18 Sobic.006G093400 potassium channel SKOR, putative, expressed -
19 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
20 Sobic.003G155350 - -


Gene co-expression network
sample Sobic002G123700 Sobic002G123700 Sobic006G121200 Sobic006G121200 Sobic002G123700--Sobic006G121200 Sobic007G213500 Sobic007G213500 Sobic002G123700--Sobic007G213500 Sobic004G026000 Sobic004G026000 Sobic002G123700--Sobic004G026000 Sobic004G203600 Sobic004G203600 Sobic002G123700--Sobic004G203600 Sobic001G468200 Sobic001G468200 Sobic002G123700--Sobic001G468200 Sobic002G320700 Sobic002G320700 Sobic002G123700--Sobic002G320700 Sobic001G368000 Sobic001G368000 Sobic002G123700--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic002G123700--Sobic001G483200 Sobic009G235100 Sobic009G235100 Sobic002G123700--Sobic009G235100 Sobic006G121200--Sobic007G213500 Sobic006G121200--Sobic004G026000 Sobic004G314100 Sobic004G314100 Sobic006G121200--Sobic004G314100 Sobic004G310400 Sobic004G310400 Sobic006G121200--Sobic004G310400 Sobic006G121200--Sobic001G468200 Sobic001G071700 Sobic001G071700 Sobic006G121200--Sobic001G071700 Sobic006G121200--Sobic009G235100 Sobic006G121200--Sobic002G123700 Sobic007G061500 Sobic007G061500 Sobic006G121200--Sobic007G061500 Sobic007G213500--Sobic004G026000 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic003G106100 Sobic003G106100 Sobic007G213500--Sobic003G106100 Sobic007G213500--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic007G213500--Sobic001G104100 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic001G096200 Sobic001G096200 Sobic004G026000--Sobic001G096200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G026000--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G026000--Sobic001G028500 Sobic006G270300 Sobic006G270300 Sobic004G203600--Sobic006G270300 Sobic001G033200 Sobic001G033200 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic007G200300 Sobic007G200300 Sobic004G203600--Sobic007G200300 Sobic003G155350 Sobic003G155350 Sobic001G468200--Sobic003G155350 Sobic001G468200--Sobic007G017300 Sobic001G468200--Sobic001G483200 Sobic001G468200--Sobic001G368000 Sobic001G176800 Sobic001G176800 Sobic001G468200--Sobic001G176800 Sobic004G184500 Sobic004G184500 Sobic001G468200--Sobic004G184500 Sobic005G094500 Sobic005G094500 Sobic001G468200--Sobic005G094500 Sobic003G202900 Sobic003G202900 Sobic001G468200--Sobic003G202900 Sobic009G170301 Sobic009G170301 Sobic001G468200--Sobic009G170301 Sobic004G202750 Sobic004G202750 Sobic002G320700--Sobic004G202750 Sobic006G170800 Sobic006G170800 Sobic002G320700--Sobic006G170800 Sobic002G320700--Sobic001G033200 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic001G368000--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic005G155001 Sobic005G155001 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G527900 Sobic001G527900 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic009G235100--Sobic006G121200 Sobic004G102301 Sobic004G102301 Sobic009G235100--Sobic004G102301 Sobic002G312600 Sobic002G312600 Sobic009G235100--Sobic002G312600 Sobic009G049100 Sobic009G049100 Sobic009G235100--Sobic009G049100 Sobic009G235100--Sobic004G310400 Sobic001G519200 Sobic001G519200 Sobic009G235100--Sobic001G519200 Sobic009G235100--Sobic004G026000 Sobic009G235100--Sobic002G123700 Sobic009G235100--Sobic007G213500
Octagon: transcription factors


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