Gene annotation
Transcriptome id Sobic.004G203600.2,Sobic.004G203600.1
Synonym Sb04g024990
Functional annotation Regulator of chromosome condensation domain containing protein, expressed
UniProt C5XX40
Pfam PF00415
Panther DB PTHR22870 PTHR22870:SF198
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26100 : Regulator of chromosome condensation (RCC1) family protein
RAP-DB (Rice) LOC_Os02g38350.1 : Regulator of chromosome condensation domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031855
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G203600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
2 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
3 Sobic.002G320700 expressed protein -
4 Sobic.002G123700 - -
5 Sobic.002G314950 - -
6 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
7 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
8 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
9 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
10 Sobic.001G361750 - -
11 Sobic.007G213500 expressed protein -
12 Sobic.002G280001 - -
13 Sobic.006G232300 cytochrome P450 72A1, putative, expressed -
14 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
15 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
16 Sobic.004G149000 - -
17 Sobic.003G106100 expressed protein -
18 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
19 Sobic.002G118400 - -
20 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic004G203600 Sobic004G203600 Sobic006G270300 Sobic006G270300 Sobic004G203600--Sobic006G270300 Sobic001G033200 Sobic001G033200 Sobic004G203600--Sobic001G033200 Sobic002G320700 Sobic002G320700 Sobic004G203600--Sobic002G320700 Sobic002G123700 Sobic002G123700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic001G104100 Sobic001G104100 Sobic004G203600--Sobic001G104100 Sobic007G200300 Sobic007G200300 Sobic004G203600--Sobic007G200300 Sobic002G227100 Sobic002G227100 Sobic006G270300--Sobic002G227100 Sobic006G270300--Sobic004G203600 Sobic006G270300--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic006G270300--Sobic002G280001 Sobic004G149000 Sobic004G149000 Sobic006G270300--Sobic004G149000 Sobic003G079600 Sobic003G079600 Sobic006G270300--Sobic003G079600 Sobic006G270300--Sobic003G150700 Sobic006G270300--Sobic002G123700 Sobic006G111400 Sobic006G111400 Sobic006G270300--Sobic006G111400 Sobic001G033200--Sobic002G320700 Sobic001G361750 Sobic001G361750 Sobic001G033200--Sobic001G361750 Sobic001G071700 Sobic001G071700 Sobic001G033200--Sobic001G071700 Sobic004G231501 Sobic004G231501 Sobic001G033200--Sobic004G231501 Sobic001G483200 Sobic001G483200 Sobic001G033200--Sobic001G483200 Sobic001G028500 Sobic001G028500 Sobic001G033200--Sobic001G028500 Sobic007G061500 Sobic007G061500 Sobic001G033200--Sobic007G061500 Sobic001G456650 Sobic001G456650 Sobic001G033200--Sobic001G456650 Sobic004G202750 Sobic004G202750 Sobic001G033200--Sobic004G202750 Sobic002G320700--Sobic004G202750 Sobic006G170800 Sobic006G170800 Sobic002G320700--Sobic006G170800 Sobic002G320700--Sobic001G033200 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic002G123700--Sobic006G121200 Sobic007G213500 Sobic007G213500 Sobic002G123700--Sobic007G213500 Sobic004G026000 Sobic004G026000 Sobic002G123700--Sobic004G026000 Sobic002G123700--Sobic004G203600 Sobic001G468200 Sobic001G468200 Sobic002G123700--Sobic001G468200 Sobic002G123700--Sobic002G320700 Sobic001G368000 Sobic001G368000 Sobic002G123700--Sobic001G368000 Sobic002G123700--Sobic001G483200 Sobic009G235100 Sobic009G235100 Sobic002G123700--Sobic009G235100 Sobic001G527900 Sobic001G527900 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic005G155001 Sobic005G155001 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic002G314950--Sobic001G483200 Sobic006G093400 Sobic006G093400 Sobic002G314950--Sobic006G093400 Sobic009G114900 Sobic009G114900 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic007G200200 Sobic007G200200 Sobic002G314950--Sobic007G200200 Sobic009G208000 Sobic009G208000 Sobic003G150700--Sobic009G208000 Sobic003G150700--Sobic003G079600 Sobic003G150700--Sobic004G203600 Sobic009G160100 Sobic009G160100 Sobic003G150700--Sobic009G160100 Sobic003G150700--Sobic006G121200 Sobic006G169600 Sobic006G169600 Sobic003G150700--Sobic006G169600 Sobic003G106100 Sobic003G106100 Sobic003G150700--Sobic003G106100 Sobic003G150700--Sobic001G033200 Sobic006G008500 Sobic006G008500 Sobic003G150700--Sobic006G008500 Sobic006G121200--Sobic007G213500 Sobic006G121200--Sobic004G026000 Sobic004G314100 Sobic004G314100 Sobic006G121200--Sobic004G314100 Sobic004G310400 Sobic004G310400 Sobic006G121200--Sobic004G310400 Sobic006G121200--Sobic001G468200 Sobic006G121200--Sobic001G071700 Sobic006G121200--Sobic009G235100 Sobic006G121200--Sobic002G123700 Sobic006G121200--Sobic007G061500 Sobic009G199900 Sobic009G199900 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic003G118500 Sobic003G118500 Sobic001G104100--Sobic003G118500 Sobic001G104100--Sobic002G320700 Sobic001G104100--Sobic002G399000 Sobic001G104100--Sobic007G213500 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic007G200300--Sobic002G320700 Sobic004G081000 Sobic004G081000 Sobic007G200300--Sobic004G081000 Sobic007G200300--Sobic009G199900 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600
Octagon: transcription factors


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