Gene annotation
Transcriptome id Sobic.003G150700.2,Sobic.003G150700.1
Synonym Sb03g013080
Functional annotation pectinacetylesterase domain containing protein, expressed
UniProt C5XIW7
Pfam PF03283
Panther DB PTHR21562 PTHR21562:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT2G46930 : Pectinacetylesterase family protein
RAP-DB (Rice) LOC_Os01g21630.1 : pectinacetylesterase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024358
Brachypodium KQK04159 , KQK04158 , KQK04160
Barley -
Wheat TraesCS5A02G322400 , TraesCS5A02G485900 , TraesCS5D02G499900 , TraesCS5B02G499800 , TraesCS5B02G499800 , TraesCS5B02G499700 , TraesCS5B02G499700 , TraesCS5D02G500000 , TraesCS5A02G486000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
2 Sobic.003G079600 expressed protein -
3 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
4 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
5 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
6 Sobic.006G169600 expressed protein -
7 Sobic.003G106100 expressed protein -
8 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
9 Sobic.006G008500 - -
10 Sobic.004G149000 - -
11 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
12 Sobic.004G231501 - -
13 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
14 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
15 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
17 Sobic.003G025300 lectin protein kinase family protein, putative, expressed -
18 Sobic.003G040300 cytochrome P450, putative, expressed -
19 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.003G362800 - -


Gene co-expression network
sample Sobic003G150700 Sobic003G150700 Sobic009G208000 Sobic009G208000 Sobic003G150700--Sobic009G208000 Sobic003G079600 Sobic003G079600 Sobic003G150700--Sobic003G079600 Sobic004G203600 Sobic004G203600 Sobic003G150700--Sobic004G203600 Sobic009G160100 Sobic009G160100 Sobic003G150700--Sobic009G160100 Sobic006G121200 Sobic006G121200 Sobic003G150700--Sobic006G121200 Sobic006G169600 Sobic006G169600 Sobic003G150700--Sobic006G169600 Sobic003G106100 Sobic003G106100 Sobic003G150700--Sobic003G106100 Sobic001G033200 Sobic001G033200 Sobic003G150700--Sobic001G033200 Sobic006G008500 Sobic006G008500 Sobic003G150700--Sobic006G008500 Sobic002G001500 Sobic002G001500 Sobic009G208000--Sobic002G001500 Sobic003G040300 Sobic003G040300 Sobic009G208000--Sobic003G040300 Sobic004G181000 Sobic004G181000 Sobic009G208000--Sobic004G181000 Sobic003G362800 Sobic003G362800 Sobic009G208000--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic009G208000--Sobic001G113400 Sobic009G208000--Sobic009G160100 Sobic003G155800 Sobic003G155800 Sobic009G208000--Sobic003G155800 Sobic009G208000--Sobic003G150700 Sobic008G103400 Sobic008G103400 Sobic009G208000--Sobic008G103400 Sobic003G079600--Sobic003G150700 Sobic003G079600--Sobic009G208000 Sobic004G149000 Sobic004G149000 Sobic003G079600--Sobic004G149000 Sobic002G227100 Sobic002G227100 Sobic003G079600--Sobic002G227100 Sobic003G079600--Sobic003G040300 Sobic006G270300 Sobic006G270300 Sobic003G079600--Sobic006G270300 Sobic007G010400 Sobic007G010400 Sobic003G079600--Sobic007G010400 Sobic003G079600--Sobic004G181000 Sobic003G079600--Sobic002G001500 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic002G320700 Sobic002G320700 Sobic004G203600--Sobic002G320700 Sobic002G123700 Sobic002G123700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic004G203600--Sobic003G150700 Sobic004G203600--Sobic006G121200 Sobic001G104100 Sobic001G104100 Sobic004G203600--Sobic001G104100 Sobic007G200300 Sobic007G200300 Sobic004G203600--Sobic007G200300 Sobic009G160100--Sobic003G362800 Sobic009G160100--Sobic002G001500 Sobic009G160100--Sobic003G155800 Sobic009G160100--Sobic009G208000 Sobic009G160100--Sobic004G181000 Sobic009G160100--Sobic001G113400 Sobic009G160100--Sobic006G169600 Sobic010G000200 Sobic010G000200 Sobic009G160100--Sobic010G000200 Sobic003G025300 Sobic003G025300 Sobic009G160100--Sobic003G025300 Sobic007G213500 Sobic007G213500 Sobic006G121200--Sobic007G213500 Sobic004G026000 Sobic004G026000 Sobic006G121200--Sobic004G026000 Sobic004G314100 Sobic004G314100 Sobic006G121200--Sobic004G314100 Sobic004G310400 Sobic004G310400 Sobic006G121200--Sobic004G310400 Sobic001G468200 Sobic001G468200 Sobic006G121200--Sobic001G468200 Sobic001G071700 Sobic001G071700 Sobic006G121200--Sobic001G071700 Sobic009G235100 Sobic009G235100 Sobic006G121200--Sobic009G235100 Sobic006G121200--Sobic002G123700 Sobic007G061500 Sobic007G061500 Sobic006G121200--Sobic007G061500 Sobic005G063600 Sobic005G063600 Sobic006G169600--Sobic005G063600 Sobic006G169600--Sobic009G160100 Sobic006G111400 Sobic006G111400 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic004G350600 Sobic004G350600 Sobic006G169600--Sobic004G350600 Sobic009G199900 Sobic009G199900 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic002G234800 Sobic002G234800 Sobic006G169600--Sobic002G234800 Sobic006G169600--Sobic003G150700 Sobic003G106100--Sobic004G314100 Sobic001G028500 Sobic001G028500 Sobic003G106100--Sobic001G028500 Sobic004G231501 Sobic004G231501 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic003G106100--Sobic001G104100 Sobic003G106100--Sobic007G213500 Sobic003G106100--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic003G106100--Sobic001G060200 Sobic003G106100--Sobic004G026000 Sobic001G033200--Sobic002G320700 Sobic001G361750 Sobic001G361750 Sobic001G033200--Sobic001G361750 Sobic001G033200--Sobic001G071700 Sobic001G033200--Sobic004G231501 Sobic001G483200 Sobic001G483200 Sobic001G033200--Sobic001G483200 Sobic001G033200--Sobic001G028500 Sobic001G033200--Sobic007G061500 Sobic001G456650 Sobic001G456650 Sobic001G033200--Sobic001G456650 Sobic004G202750 Sobic004G202750 Sobic001G033200--Sobic004G202750 Sobic003G241600 Sobic003G241600 Sobic006G008500--Sobic003G241600 Sobic001G159250 Sobic001G159250 Sobic006G008500--Sobic001G159250 Sobic001G018550 Sobic001G018550 Sobic006G008500--Sobic001G018550 Sobic007G046600 Sobic007G046600 Sobic006G008500--Sobic007G046600 Sobic006G008500--Sobic003G150700 Sobic006G008500--Sobic005G063600 Sobic002G231400 Sobic002G231400 Sobic006G008500--Sobic002G231400 Sobic002G013600 Sobic002G013600 Sobic006G008500--Sobic002G013600 Sobic004G165600 Sobic004G165600 Sobic006G008500--Sobic004G165600
Octagon: transcription factors


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