Gene annotation
Transcriptome id Sobic.003G040300.2,Sobic.003G040300.5,Sobic.003G040300.4,Sobic.003G040300.3,Sobic.003G040300.1
Synonym Sb03g003590, CYP96A10
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1W0VVM6 , A0A1W0VVP8
Pfam PF00067
Panther DB PTHR24296 PTHR24296:SF33
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G39490 : cytochrome P450, family 96, subfamily A, polypeptide 10
RAP-DB (Rice) LOC_Os01g08810.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a035817 , Zm00025a031852
Brachypodium KQJ92398 , KQK00171
Barley HORVU4Hr1G083930.5 , HORVU4Hr1G083930.4 , HORVU4Hr1G083930.3 , HORVU4Hr1G083930.2 , HORVU4Hr1G083930.1 , HORVU4Hr1G064570.1 , HORVU2Hr1G001150.3 , HORVU4Hr1G083940.2 , HORVU4Hr1G083940.3 , HORVU4Hr1G083940.1 , HORVU3Hr1G020800.1 , HORVU6Hr1G053810.2 , HORVU6Hr1G053810.1 , HORVU4Hr1G076700.1 , HORVU4Hr1G076700.2 , HORVU2Hr1G001150.1 , HORVU2Hr1G001150.2 , HORVU3Hr1G105120.2 , HORVU3Hr1G105120.1
Wheat TraesCS4A02G019400 , TraesCS3D02G474600 , TraesCS6B02G239400 , TraesCS6B02G239400 , TraesCS6D02G193600 , TraesCS6A02G210500 , TraesCS3A02G479700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
2 Sobic.001G454600 expressed protein -
3 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
4 Sobic.001G090700 expressed protein -
5 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G025300 lectin protein kinase family protein, putative, expressed -
7 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
8 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.003G362800 - -
10 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
11 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
12 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
13 Sobic.003G001650 - -
14 Sobic.003G079600 expressed protein -
15 Sobic.009G026600 - -
16 Sobic.005G048800 expressed protein -
17 Sobic.001G370800 - -
18 Sobic.002G206900 GEX2, putative, expressed -
19 Sobic.007G010400 - -
20 Sobic.009G223900 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G040300 Sobic003G040300 Sobic009G208000 Sobic009G208000 Sobic003G040300--Sobic009G208000 Sobic001G454600 Sobic001G454600 Sobic003G040300--Sobic001G454600 Sobic002G001500 Sobic002G001500 Sobic003G040300--Sobic002G001500 Sobic001G090700 Sobic001G090700 Sobic003G040300--Sobic001G090700 Sobic004G181000 Sobic004G181000 Sobic003G040300--Sobic004G181000 Sobic003G025300 Sobic003G025300 Sobic003G040300--Sobic003G025300 Sobic008G103400 Sobic008G103400 Sobic003G040300--Sobic008G103400 Sobic008G170800 Sobic008G170800 Sobic003G040300--Sobic008G170800 Sobic003G362800 Sobic003G362800 Sobic003G040300--Sobic003G362800 Sobic009G208000--Sobic002G001500 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic009G208000--Sobic001G113400 Sobic009G160100 Sobic009G160100 Sobic009G208000--Sobic009G160100 Sobic003G155800 Sobic003G155800 Sobic009G208000--Sobic003G155800 Sobic003G150700 Sobic003G150700 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic001G454600--Sobic001G090700 Sobic001G454600--Sobic008G170800 Sobic002G206900 Sobic002G206900 Sobic001G454600--Sobic002G206900 Sobic001G454600--Sobic003G040300 Sobic003G001650 Sobic003G001650 Sobic001G454600--Sobic003G001650 Sobic004G218400 Sobic004G218400 Sobic001G454600--Sobic004G218400 Sobic001G038700 Sobic001G038700 Sobic001G454600--Sobic001G038700 Sobic006G167400 Sobic006G167400 Sobic001G454600--Sobic006G167400 Sobic001G454600--Sobic003G362800 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic009G223900 Sobic009G223900 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic001G090700--Sobic008G170800 Sobic001G090700--Sobic001G454600 Sobic010G042300 Sobic010G042300 Sobic001G090700--Sobic010G042300 Sobic001G090700--Sobic001G038700 Sobic006G279100 Sobic006G279100 Sobic001G090700--Sobic006G279100 Sobic009G026600 Sobic009G026600 Sobic001G090700--Sobic009G026600 Sobic001G460900 Sobic001G460900 Sobic001G090700--Sobic001G460900 Sobic010G012200 Sobic010G012200 Sobic001G090700--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic001G090700--Sobic008G190600 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic004G181000--Sobic001G113400 Sobic007G010400 Sobic007G010400 Sobic003G025300--Sobic007G010400 Sobic003G025300--Sobic003G040300 Sobic003G025300--Sobic009G160100 Sobic003G025300--Sobic009G208000 Sobic003G025300--Sobic002G001500 Sobic003G361800 Sobic003G361800 Sobic003G025300--Sobic003G361800 Sobic003G025300--Sobic008G103400 Sobic005G048800 Sobic005G048800 Sobic003G025300--Sobic005G048800 Sobic010G000200 Sobic010G000200 Sobic003G025300--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic008G170800--Sobic001G090700 Sobic006G157450 Sobic006G157450 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic003G155000 Sobic003G155000 Sobic008G170800--Sobic003G155000 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic003G253700 Sobic003G253700 Sobic008G170800--Sobic003G253700 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G362800--Sobic003G001650
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.