Gene annotation
Transcriptome id Sobic.009G223900.1,Sobic.009G223900.2
Synonym Sb09g027740
Functional annotation protein binding protein, putative, expressed
UniProt A0A1B6P9W2
Pfam PF12906 PF12428
Panther DB PTHR23012 PTHR23012:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT2G01275 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os05g47900.1 : protein binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a044480 , Zm00025a038847
Brachypodium PNT70762 , KQK05007
Barley HORVU1Hr1G083720.1
Wheat TraesCS3B02G297400 , TraesCS3A02G264000 , TraesCS3D02G264100 , TraesCS3D02G264100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
2 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G362800 - -
4 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
5 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
6 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
7 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
8 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
9 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
10 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
11 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
12 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
13 Sobic.002G085600 - -
14 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
16 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
17 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
18 Sobic.002G110600 regulatory protein, putative, expressed -
19 Sobic.003G149400 lipase, putative, expressed -
20 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G223900 Sobic009G223900 Sobic002G001500 Sobic002G001500 Sobic009G223900--Sobic002G001500 Sobic004G181000 Sobic004G181000 Sobic009G223900--Sobic004G181000 Sobic003G362800 Sobic003G362800 Sobic009G223900--Sobic003G362800 Sobic003G155800 Sobic003G155800 Sobic009G223900--Sobic003G155800 Sobic002G398600 Sobic002G398600 Sobic009G223900--Sobic002G398600 Sobic008G103400 Sobic008G103400 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic001G113400 Sobic001G113400 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic004G181000--Sobic001G113400 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic008G103400--Sobic004G181000 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic010G012200 Sobic010G012200 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic001G503700--Sobic009G223900 Sobic003G149400 Sobic003G149400 Sobic001G503700--Sobic003G149400 Sobic003G225200 Sobic003G225200 Sobic001G503700--Sobic003G225200 Sobic001G503700--Sobic002G001500 Sobic007G077466 Sobic007G077466 Sobic001G503700--Sobic007G077466 Sobic001G503700--Sobic004G173200 Sobic007G010400 Sobic007G010400 Sobic001G503700--Sobic007G010400 Sobic001G503700--Sobic010G000200 Sobic001G503700--Sobic002G110600 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic001G113400--Sobic009G208000 Sobic001G113400--Sobic004G144300 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic001G113400--Sobic004G181000 Sobic009G192933 Sobic009G192933 Sobic001G113400--Sobic009G192933 Sobic003G155000 Sobic003G155000 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G365200 Sobic003G365200 Sobic003G262600--Sobic003G365200 Sobic003G262600--Sobic009G223900 Sobic003G262600--Sobic003G362800
Octagon: transcription factors


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