Gene annotation
Transcriptome id Sobic.003G149400.1
Synonym Sb03g012970
Functional annotation lipase, putative, expressed
UniProt C5XIV4
Pfam PF12695
Panther DB PTHR11614 PTHR11614:SF110
NCBI CDD KOG1455; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62860 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g29974.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a003644 , Zm00025a036974 , Zm00025a024343
Brachypodium PNT73022 , PNT73023 , KQK04146 , KQK04147 , KQK06696 , KQK06697 , PNT62603 , PNT70441 , PNT70442
Barley HORVU2Hr1G090120.7 , HORVU4Hr1G024280.2 , HORVU4Hr1G024280.1 , HORVU2Hr1G090120.14 , HORVU2Hr1G090120.15 , HORVU2Hr1G090120.10 , HORVU2Hr1G090120.11 , HORVU2Hr1G090120.12 , HORVU2Hr1G090120.13 , HORVU1Hr1G058820.1 , HORVU1Hr1G058820.2 , HORVU1Hr1G058820.3 , HORVU1Hr1G058820.4 , HORVU1Hr1G058820.5 , HORVU2Hr1G090120.8 , HORVU2Hr1G090120.9 , HORVU2Hr1G090120.6 , HORVU2Hr1G090120.4 , HORVU2Hr1G090120.5 , HORVU2Hr1G090120.2 , HORVU2Hr1G090120.3 , HORVU2Hr1G090120.1
Wheat TraesCS2A02G378400 , TraesCS1A02G230500 , TraesCS1A02G230500 , TraesCS1A02G230500 , TraesCS4B02G138400 , TraesCS1D02G231500 , TraesCS1D02G231500 , TraesCS1D02G231500 , TraesCS2B02G395400 , TraesCS1B02G243700 , TraesCS1B02G243700 , TraesCS1B02G243700 , TraesCS4D02G133100 , TraesCS4A02G178300 , TraesCS2D02G374700
Populus -


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cDNA sequences
Sobic.003G149400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G224000 - -
2 Sobic.007G010400 - -
3 Sobic.008G065700 RNA recognition motif containing protein, expressed -
4 Sobic.009G122000 Annexin arabidopsis 3(PubMedID : 26320239)@annexin, putative, expressed -
5 Sobic.005G110553 - -
6 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
7 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
8 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
9 Sobic.001G424650 - -
10 Sobic.009G223900 protein binding protein, putative, expressed -
11 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
12 Sobic.007G077466 - -
13 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
15 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
16 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
17 Sobic.002G110600 regulatory protein, putative, expressed -
18 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
19 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
20 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G149400 Sobic003G149400 Sobic004G224000 Sobic004G224000 Sobic003G149400--Sobic004G224000 Sobic007G010400 Sobic007G010400 Sobic003G149400--Sobic007G010400 Sobic008G065700 Sobic008G065700 Sobic003G149400--Sobic008G065700 Sobic009G122000 Sobic009G122000 Sobic003G149400--Sobic009G122000 Sobic005G110553 Sobic005G110553 Sobic003G149400--Sobic005G110553 Sobic001G503700 Sobic001G503700 Sobic003G149400--Sobic001G503700 Sobic001G367900 Sobic001G367900 Sobic003G149400--Sobic001G367900 Sobic002G001500 Sobic002G001500 Sobic003G149400--Sobic002G001500 Sobic001G424650 Sobic001G424650 Sobic003G149400--Sobic001G424650 Sobic004G224000--Sobic003G149400 Sobic004G224000--Sobic008G065700 Sobic004G224000--Sobic009G122000 Sobic004G224000--Sobic001G424650 Sobic004G224000--Sobic005G110553 Sobic010G249600 Sobic010G249600 Sobic004G224000--Sobic010G249600 Sobic001G492400 Sobic001G492400 Sobic004G224000--Sobic001G492400 Sobic004G224000--Sobic001G503700 Sobic006G118150 Sobic006G118150 Sobic004G224000--Sobic006G118150 Sobic007G010400--Sobic003G149400 Sobic007G010400--Sobic001G367900 Sobic007G010400--Sobic001G503700 Sobic003G025300 Sobic003G025300 Sobic007G010400--Sobic003G025300 Sobic007G010400--Sobic002G001500 Sobic007G077466 Sobic007G077466 Sobic007G010400--Sobic007G077466 Sobic008G103400 Sobic008G103400 Sobic007G010400--Sobic008G103400 Sobic007G010400--Sobic009G122000 Sobic009G160100 Sobic009G160100 Sobic007G010400--Sobic009G160100 Sobic008G065700--Sobic003G149400 Sobic008G065700--Sobic004G224000 Sobic008G065700--Sobic005G110553 Sobic008G065700--Sobic001G367900 Sobic003G092150 Sobic003G092150 Sobic008G065700--Sobic003G092150 Sobic007G226000 Sobic007G226000 Sobic008G065700--Sobic007G226000 Sobic008G065700--Sobic009G122000 Sobic007G210200 Sobic007G210200 Sobic008G065700--Sobic007G210200 Sobic002G377400 Sobic002G377400 Sobic008G065700--Sobic002G377400 Sobic009G122000--Sobic005G110553 Sobic009G122000--Sobic003G149400 Sobic009G122000--Sobic001G424650 Sobic009G122000--Sobic004G224000 Sobic009G122000--Sobic007G010400 Sobic009G122000--Sobic008G065700 Sobic009G122000--Sobic007G210200 Sobic010G019500 Sobic010G019500 Sobic009G122000--Sobic010G019500 Sobic009G122000--Sobic001G367900 Sobic005G110553--Sobic009G122000 Sobic005G110553--Sobic001G424650 Sobic005G110553--Sobic003G149400 Sobic006G268100 Sobic006G268100 Sobic005G110553--Sobic006G268100 Sobic005G110553--Sobic008G065700 Sobic005G110553--Sobic004G224000 Sobic001G334400 Sobic001G334400 Sobic005G110553--Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic005G110553--Sobic009G183650 Sobic005G110553--Sobic007G210200 Sobic009G223900 Sobic009G223900 Sobic001G503700--Sobic009G223900 Sobic001G503700--Sobic003G149400 Sobic003G225200 Sobic003G225200 Sobic001G503700--Sobic003G225200 Sobic001G503700--Sobic002G001500 Sobic001G503700--Sobic007G077466 Sobic004G173200 Sobic004G173200 Sobic001G503700--Sobic004G173200 Sobic001G503700--Sobic007G010400 Sobic010G000200 Sobic010G000200 Sobic001G503700--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G503700--Sobic002G110600 Sobic001G367900--Sobic007G010400 Sobic001G367900--Sobic003G149400 Sobic001G367900--Sobic008G065700 Sobic001G367900--Sobic007G210200 Sobic003G331200 Sobic003G331200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic001G367900--Sobic009G122000 Sobic003G362800 Sobic003G362800 Sobic002G001500--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic002G001500--Sobic001G113400 Sobic004G181000 Sobic004G181000 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic003G155800 Sobic003G155800 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200 Sobic009G088300 Sobic009G088300 Sobic001G424650--Sobic009G088300 Sobic001G424650--Sobic001G492400 Sobic001G424650--Sobic005G110553 Sobic001G370800 Sobic001G370800 Sobic001G424650--Sobic001G370800 Sobic001G442000 Sobic001G442000 Sobic001G424650--Sobic001G442000 Sobic001G424650--Sobic009G122000 Sobic001G424650--Sobic001G334400 Sobic001G424650--Sobic004G224000 Sobic006G255200 Sobic006G255200 Sobic001G424650--Sobic006G255200
Octagon: transcription factors


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