Gene annotation
Transcriptome id Sobic.002G001500.1
Synonym EMB1444
Functional annotation pentatricopeptide containing protein, putative, expressed
UniProt A0A1B6Q8K3
Pfam PF14215
Panther DB PTHR13902 PTHR13902:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06150 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os07g01130.1 : pentatricopeptide containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044822
Brachypodium -
Barley HORVU2Hr1G064950.67 , HORVU2Hr1G064950.64 , HORVU2Hr1G064950.59 , HORVU2Hr1G064950.52 , HORVU2Hr1G064950.50 , HORVU2Hr1G064950.51 , HORVU2Hr1G064950.56 , HORVU2Hr1G064950.57 , HORVU2Hr1G064950.54 , HORVU2Hr1G064950.55 , HORVU2Hr1G064950.12 , HORVU2Hr1G064950.10 , HORVU2Hr1G064950.62 , HORVU2Hr1G064950.61 , HORVU2Hr1G064950.60 , HORVU2Hr1G064950.66 , HORVU2Hr1G064950.65 , HORVU2Hr1G064950.69 , HORVU2Hr1G064950.68 , HORVU2Hr1G064950.70 , HORVU2Hr1G064950.38 , HORVU2Hr1G064950.39 , HORVU2Hr1G064950.34 , HORVU2Hr1G064950.35 , HORVU2Hr1G064950.37 , HORVU2Hr1G064950.30 , HORVU2Hr1G064950.31 , HORVU2Hr1G064950.32 , HORVU2Hr1G064950.9 , HORVU2Hr1G064950.45 , HORVU2Hr1G064950.44 , HORVU2Hr1G064950.47 , HORVU2Hr1G064950.46 , HORVU2Hr1G064950.41 , HORVU2Hr1G064950.40 , HORVU2Hr1G064950.42 , HORVU2Hr1G064950.49 , HORVU2Hr1G064950.48
Wheat TraesCS2B02G286700 , TraesCS2B02G286700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362800 - -
2 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
3 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G223900 protein binding protein, putative, expressed -
5 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
6 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
7 Sobic.002G085600 - -
8 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
9 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
10 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
11 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
12 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
13 Sobic.007G077466 - -
14 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
15 Sobic.010G000200 expressed protein -
16 Sobic.003G001650 - -
17 Sobic.002G110600 regulatory protein, putative, expressed -
18 Sobic.003G040300 cytochrome P450, putative, expressed -
19 Sobic.003G149400 lipase, putative, expressed -
20 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -


Gene co-expression network
sample Sobic002G001500 Sobic002G001500 Sobic003G362800 Sobic003G362800 Sobic002G001500--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic002G001500--Sobic001G113400 Sobic004G181000 Sobic004G181000 Sobic002G001500--Sobic004G181000 Sobic009G223900 Sobic009G223900 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic008G103400 Sobic008G103400 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic003G155800 Sobic003G155800 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic001G113400--Sobic009G208000 Sobic001G113400--Sobic004G144300 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic001G113400--Sobic004G181000 Sobic009G192933 Sobic009G192933 Sobic001G113400--Sobic009G192933 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic004G181000--Sobic001G113400 Sobic009G223900--Sobic002G001500 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic002G398600 Sobic002G398600 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic009G208000--Sobic002G001500 Sobic003G040300 Sobic003G040300 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic009G208000--Sobic001G113400 Sobic009G160100 Sobic009G160100 Sobic009G208000--Sobic009G160100 Sobic009G208000--Sobic003G155800 Sobic003G150700 Sobic003G150700 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic010G012200 Sobic010G012200 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic001G191300 Sobic001G191300 Sobic002G085600--Sobic001G191300 Sobic004G305300 Sobic004G305300 Sobic002G085600--Sobic004G305300 Sobic002G085600--Sobic009G223900 Sobic002G085600--Sobic004G144300 Sobic002G085600--Sobic002G398600 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic004G173200--Sobic010G000200 Sobic004G173200--Sobic003G262600 Sobic004G173200--Sobic002G398600 Sobic001G370800 Sobic001G370800 Sobic004G173200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic004G173200--Sobic002G187900 Sobic004G173200--Sobic003G362800 Sobic006G249600 Sobic006G249600 Sobic004G173200--Sobic006G249600 Sobic001G212900 Sobic001G212900 Sobic004G173200--Sobic001G212900 Sobic004G173200--Sobic002G001500
Octagon: transcription factors


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