Gene annotation
Transcriptome id Sobic.002G085600.1
Synonym
Functional annotation -
UniProt A0A1B6Q9Y4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
2 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
3 Sobic.009G192933 - -
4 Sobic.003G362800 - -
5 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
6 Sobic.004G305300 - -
7 Sobic.009G223900 protein binding protein, putative, expressed -
8 Sobic.004G144300 - -
9 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
11 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.001G019601 - -
13 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
14 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
15 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
16 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.007G077466 - -
18 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
19 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.002G110600 regulatory protein, putative, expressed -


Gene co-expression network
sample Sobic002G085600 Sobic002G085600 Sobic001G113400 Sobic001G113400 Sobic002G085600--Sobic001G113400 Sobic002G001500 Sobic002G001500 Sobic002G085600--Sobic002G001500 Sobic009G192933 Sobic009G192933 Sobic002G085600--Sobic009G192933 Sobic003G362800 Sobic003G362800 Sobic002G085600--Sobic003G362800 Sobic001G191300 Sobic001G191300 Sobic002G085600--Sobic001G191300 Sobic004G305300 Sobic004G305300 Sobic002G085600--Sobic004G305300 Sobic009G223900 Sobic009G223900 Sobic002G085600--Sobic009G223900 Sobic004G144300 Sobic004G144300 Sobic002G085600--Sobic004G144300 Sobic002G398600 Sobic002G398600 Sobic002G085600--Sobic002G398600 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic009G208000 Sobic009G208000 Sobic001G113400--Sobic009G208000 Sobic001G113400--Sobic004G144300 Sobic003G155800 Sobic003G155800 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic004G181000 Sobic004G181000 Sobic001G113400--Sobic004G181000 Sobic001G113400--Sobic009G192933 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic008G103400 Sobic008G103400 Sobic002G001500--Sobic008G103400 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic009G192933--Sobic002G085600 Sobic009G192933--Sobic001G113400 Sobic009G192933--Sobic004G144300 Sobic001G019601 Sobic001G019601 Sobic009G192933--Sobic001G019601 Sobic009G192933--Sobic002G001500 Sobic009G192933--Sobic003G362800 Sobic003G001650 Sobic003G001650 Sobic009G192933--Sobic003G001650 Sobic009G192933--Sobic004G305300 Sobic002G274000 Sobic002G274000 Sobic009G192933--Sobic002G274000 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G362800--Sobic003G001650 Sobic007G077466 Sobic007G077466 Sobic001G191300--Sobic007G077466 Sobic003G118500 Sobic003G118500 Sobic001G191300--Sobic003G118500 Sobic001G350300 Sobic001G350300 Sobic001G191300--Sobic001G350300 Sobic001G191300--Sobic004G305300 Sobic002G399000 Sobic002G399000 Sobic001G191300--Sobic002G399000 Sobic001G191300--Sobic003G362800 Sobic001G191300--Sobic002G085600 Sobic001G191300--Sobic002G001500 Sobic002G110600 Sobic002G110600 Sobic001G191300--Sobic002G110600 Sobic004G305300--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic001G104100 Sobic001G104100 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G350600 Sobic004G350600 Sobic004G305300--Sobic004G350600 Sobic004G305300--Sobic002G399000 Sobic004G305300--Sobic007G077466 Sobic009G223900--Sobic002G001500 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic004G310400 Sobic004G310400 Sobic004G144300--Sobic004G310400 Sobic004G144300--Sobic003G362800 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic004G144300--Sobic001G520000 Sobic004G144300--Sobic002G085600 Sobic004G144300--Sobic003G118500 Sobic009G049100 Sobic009G049100 Sobic004G144300--Sobic009G049100 Sobic001G096200 Sobic001G096200 Sobic004G144300--Sobic001G096200 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800
Octagon: transcription factors


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