Gene annotation
Transcriptome id Sobic.003G118500.1
Synonym Sb03g010000
Functional annotation OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1B6Q2Q8
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF116
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G28410 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os02g06520.1 : OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023975
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G118500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G305300 - -
2 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
3 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
4 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
5 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
7 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
8 Sobic.007G077466 - -
9 Sobic.003G362800 - -
10 Sobic.004G144300 - -
11 Sobic.002G399000 expressed protein -
12 Sobic.004G350600 AMP-binding domain containing protein, expressed -
13 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
14 Sobic.002G110600 regulatory protein, putative, expressed -
15 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
16 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
18 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
19 Sobic.002G197400 expressed protein -
20 Sobic.003G106100 expressed protein -


Gene co-expression network
sample Sobic003G118500 Sobic003G118500 Sobic004G305300 Sobic004G305300 Sobic003G118500--Sobic004G305300 Sobic001G104100 Sobic001G104100 Sobic003G118500--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic003G118500--Sobic001G191300 Sobic004G310400 Sobic004G310400 Sobic003G118500--Sobic004G310400 Sobic001G350300 Sobic001G350300 Sobic003G118500--Sobic001G350300 Sobic004G026000 Sobic004G026000 Sobic003G118500--Sobic004G026000 Sobic001G096200 Sobic001G096200 Sobic003G118500--Sobic001G096200 Sobic007G077466 Sobic007G077466 Sobic003G118500--Sobic007G077466 Sobic003G362800 Sobic003G362800 Sobic003G118500--Sobic003G362800 Sobic004G305300--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic004G305300--Sobic001G104100 Sobic002G085600 Sobic002G085600 Sobic004G305300--Sobic002G085600 Sobic004G350600 Sobic004G350600 Sobic004G305300--Sobic004G350600 Sobic002G399000 Sobic002G399000 Sobic004G305300--Sobic002G399000 Sobic004G305300--Sobic007G077466 Sobic009G199900 Sobic009G199900 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic003G106100 Sobic003G106100 Sobic001G104100--Sobic003G106100 Sobic004G314100 Sobic004G314100 Sobic001G104100--Sobic004G314100 Sobic001G028500 Sobic001G028500 Sobic001G104100--Sobic001G028500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic001G104100--Sobic002G399000 Sobic007G213500 Sobic007G213500 Sobic001G104100--Sobic007G213500 Sobic001G191300--Sobic007G077466 Sobic001G191300--Sobic003G118500 Sobic001G191300--Sobic001G350300 Sobic001G191300--Sobic004G305300 Sobic001G191300--Sobic002G399000 Sobic001G191300--Sobic003G362800 Sobic001G191300--Sobic002G085600 Sobic002G001500 Sobic002G001500 Sobic001G191300--Sobic002G001500 Sobic002G110600 Sobic002G110600 Sobic001G191300--Sobic002G110600 Sobic004G310400--Sobic004G026000 Sobic004G144300 Sobic004G144300 Sobic004G310400--Sobic004G144300 Sobic004G310400--Sobic001G096200 Sobic004G310400--Sobic004G314100 Sobic004G310400--Sobic003G118500 Sobic004G310400--Sobic001G104100 Sobic006G121200 Sobic006G121200 Sobic004G310400--Sobic006G121200 Sobic004G310400--Sobic007G213500 Sobic008G160100 Sobic008G160100 Sobic004G310400--Sobic008G160100 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic004G026000--Sobic001G096200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G026000--Sobic004G231501 Sobic004G026000--Sobic001G028500 Sobic001G096200--Sobic004G310400 Sobic001G096200--Sobic004G026000 Sobic001G520000 Sobic001G520000 Sobic001G096200--Sobic001G520000 Sobic001G096200--Sobic004G314100 Sobic003G155800 Sobic003G155800 Sobic001G096200--Sobic003G155800 Sobic006G243000 Sobic006G243000 Sobic001G096200--Sobic006G243000 Sobic001G096200--Sobic003G118500 Sobic003G253700 Sobic003G253700 Sobic001G096200--Sobic003G253700 Sobic001G096200--Sobic004G231501 Sobic007G077466--Sobic001G191300 Sobic007G077466--Sobic002G001500 Sobic001G503700 Sobic001G503700 Sobic007G077466--Sobic001G503700 Sobic007G077466--Sobic003G118500 Sobic007G077466--Sobic004G305300 Sobic007G077466--Sobic003G362800 Sobic007G077466--Sobic002G110600 Sobic010G000200 Sobic010G000200 Sobic007G077466--Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic007G077466--Sobic004G173200 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic004G181000 Sobic004G181000 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic008G103400 Sobic008G103400 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650
Octagon: transcription factors


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