Gene annotation
Transcriptome id Sobic.002G399000.5,Sobic.002G399000.6,Sobic.002G399000.8,Sobic.002G399000.9,Sobic.002G399000.4,Sobic.002G399000.7
Synonym Sb02g041370
Functional annotation expressed protein
UniProt A0A1W0W7P2 , C5X429
Pfam PF12776
Panther DB PTHR31704 PTHR31704:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24960 : -
RAP-DB (Rice) LOC_Os07g45330.1 : expressed protein
MaizeGDB (Corn) Zm00025a048981
Brachypodium KQK14920 , PNT74649
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.004G350600 AMP-binding domain containing protein, expressed -
3 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
4 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
5 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
6 Sobic.004G202750 - -
7 Sobic.004G305300 - -
8 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
9 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
11 Sobic.002G320700 expressed protein -
12 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
13 Sobic.001G028500 expressed protein -
14 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
17 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
18 Sobic.002G197400 expressed protein -
19 Sobic.009G223900 protein binding protein, putative, expressed -
20 Sobic.009G112500 lipase, putative, expressed -


Gene co-expression network
sample Sobic002G399000 Sobic002G399000 Sobic001G350300 Sobic001G350300 Sobic002G399000--Sobic001G350300 Sobic004G350600 Sobic004G350600 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic006G170800 Sobic006G170800 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic003G118500 Sobic003G118500 Sobic002G399000--Sobic003G118500 Sobic005G025400 Sobic005G025400 Sobic002G399000--Sobic005G025400 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic002G320700 Sobic002G320700 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic004G350600--Sobic001G350300 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic004G350600--Sobic001G028500 Sobic004G350600--Sobic006G170800 Sobic009G199900 Sobic009G199900 Sobic004G350600--Sobic009G199900 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic004G350600--Sobic003G118500 Sobic001G104100--Sobic009G199900 Sobic004G026000 Sobic004G026000 Sobic001G104100--Sobic004G026000 Sobic003G106100 Sobic003G106100 Sobic001G104100--Sobic003G106100 Sobic004G314100 Sobic004G314100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic001G104100--Sobic003G118500 Sobic001G104100--Sobic002G320700 Sobic001G104100--Sobic002G399000 Sobic007G213500 Sobic007G213500 Sobic001G104100--Sobic007G213500 Sobic007G077466 Sobic007G077466 Sobic001G191300--Sobic007G077466 Sobic001G191300--Sobic003G118500 Sobic001G191300--Sobic001G350300 Sobic001G191300--Sobic004G305300 Sobic001G191300--Sobic002G399000 Sobic003G362800 Sobic003G362800 Sobic001G191300--Sobic003G362800 Sobic002G085600 Sobic002G085600 Sobic001G191300--Sobic002G085600 Sobic002G001500 Sobic002G001500 Sobic001G191300--Sobic002G001500 Sobic002G110600 Sobic002G110600 Sobic001G191300--Sobic002G110600 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic010G242000 Sobic010G242000 Sobic006G170800--Sobic010G242000 Sobic006G170800--Sobic004G350600 Sobic006G170800--Sobic004G202750 Sobic006G170800--Sobic001G104100 Sobic006G170800--Sobic005G025400 Sobic004G202750--Sobic001G028500 Sobic001G350800 Sobic001G350800 Sobic004G202750--Sobic001G350800 Sobic004G202750--Sobic002G320700 Sobic009G004500 Sobic009G004500 Sobic004G202750--Sobic009G004500 Sobic004G231501 Sobic004G231501 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic007G061500 Sobic007G061500 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic001G483200 Sobic001G483200 Sobic004G202750--Sobic001G483200 Sobic004G305300--Sobic001G350300 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G305300--Sobic004G350600 Sobic004G305300--Sobic002G399000 Sobic004G305300--Sobic007G077466 Sobic003G118500--Sobic004G305300 Sobic003G118500--Sobic001G104100 Sobic003G118500--Sobic001G191300 Sobic004G310400 Sobic004G310400 Sobic003G118500--Sobic004G310400 Sobic003G118500--Sobic001G350300 Sobic003G118500--Sobic004G026000 Sobic001G096200 Sobic001G096200 Sobic003G118500--Sobic001G096200 Sobic003G118500--Sobic007G077466 Sobic003G118500--Sobic003G362800 Sobic005G025400--Sobic010G242000 Sobic003G440500 Sobic003G440500 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic009G223900 Sobic009G223900 Sobic005G025400--Sobic009G223900 Sobic005G025400--Sobic002G085600 Sobic005G025400--Sobic004G202750 Sobic005G025400--Sobic001G350800
Octagon: transcription factors


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