Gene annotation
Transcriptome id Sobic.009G112500.1
Synonym Sb09g018060
Functional annotation lipase, putative, expressed
UniProt C5YWV2
Pfam PF12695
Panther DB PTHR11614 PTHR11614:SF88
NCBI CDD KOG1455; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47630 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g29974.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a036974 , Zm00025a024343
Brachypodium KQK04146 , KQK04147 , KQK06696 , KQK06697 , PNT70442 , PNT70441
Barley HORVU2Hr1G090120.10 , HORVU2Hr1G090120.11 , HORVU2Hr1G090120.5 , HORVU1Hr1G058820.8 , HORVU1Hr1G058820.9 , HORVU1Hr1G058820.1 , HORVU1Hr1G058820.2 , HORVU1Hr1G058820.3 , HORVU1Hr1G058820.4 , HORVU1Hr1G058820.5 , HORVU1Hr1G058820.6 , HORVU1Hr1G058820.7 , HORVU2Hr1G090120.8 , HORVU2Hr1G090120.9 , HORVU1Hr1G058820.10 , HORVU2Hr1G090120.6 , HORVU2Hr1G090120.7 , HORVU2Hr1G090120.4 , HORVU2Hr1G090120.2 , HORVU2Hr1G090120.3 , HORVU2Hr1G090120.1
Wheat TraesCS2A02G378400 , TraesCS1A02G230500 , TraesCS1A02G230500 , TraesCS1A02G230500 , TraesCS1D02G231500 , TraesCS1D02G231500 , TraesCS1D02G231500 , TraesCS2B02G395400 , TraesCS1B02G243700 , TraesCS1B02G243700 , TraesCS1B02G243700 , TraesCS2D02G374700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G112500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G118401 - -
2 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
3 Sobic.002G399000 expressed protein -
4 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
5 Sobic.002G387000 expressed protein -
6 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
7 Sobic.005G014400 esterase, putative, expressed -
8 Sobic.003G251900 expressed protein -
9 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
11 Sobic.004G202750 - -
12 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
13 Sobic.001G350800 - -
14 Sobic.009G080000 OsSPL15 - SBP-box gene family member, expressed -
15 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
16 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
17 Sobic.009G149600 transmembrane protein 18, putative, expressed -
18 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
19 Sobic.008G159800 - -
20 Sobic.007G189900 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G112500 Sobic009G112500 Sobic010G118401 Sobic010G118401 Sobic009G112500--Sobic010G118401 Sobic004G327200 Sobic004G327200 Sobic009G112500--Sobic004G327200 Sobic002G399000 Sobic002G399000 Sobic009G112500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic009G112500--Sobic009G181900 Sobic002G387000 Sobic002G387000 Sobic009G112500--Sobic002G387000 Sobic006G249600 Sobic006G249600 Sobic009G112500--Sobic006G249600 Sobic005G014400 Sobic005G014400 Sobic009G112500--Sobic005G014400 Sobic003G251900 Sobic003G251900 Sobic009G112500--Sobic003G251900 Sobic005G025400 Sobic005G025400 Sobic009G112500--Sobic005G025400 Sobic010G118401--Sobic009G112500 Sobic010G118401--Sobic002G387000 Sobic004G202750 Sobic004G202750 Sobic010G118401--Sobic004G202750 Sobic010G278400 Sobic010G278400 Sobic010G118401--Sobic010G278400 Sobic010G242000 Sobic010G242000 Sobic010G118401--Sobic010G242000 Sobic007G114650 Sobic007G114650 Sobic010G118401--Sobic007G114650 Sobic004G228000 Sobic004G228000 Sobic010G118401--Sobic004G228000 Sobic001G087500 Sobic001G087500 Sobic010G118401--Sobic001G087500 Sobic010G118401--Sobic002G399000 Sobic009G080000 Sobic009G080000 Sobic004G327200--Sobic009G080000 Sobic003G253700 Sobic003G253700 Sobic004G327200--Sobic003G253700 Sobic004G327200--Sobic006G249600 Sobic003G155000 Sobic003G155000 Sobic004G327200--Sobic003G155000 Sobic002G209450 Sobic002G209450 Sobic004G327200--Sobic002G209450 Sobic009G223900 Sobic009G223900 Sobic004G327200--Sobic009G223900 Sobic002G413800 Sobic002G413800 Sobic004G327200--Sobic002G413800 Sobic002G398600 Sobic002G398600 Sobic004G327200--Sobic002G398600 Sobic004G327200--Sobic009G112500 Sobic001G350300 Sobic001G350300 Sobic002G399000--Sobic001G350300 Sobic004G350600 Sobic004G350600 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic006G170800 Sobic006G170800 Sobic002G399000--Sobic006G170800 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic003G118500 Sobic003G118500 Sobic002G399000--Sobic003G118500 Sobic002G399000--Sobic005G025400 Sobic009G181900--Sobic002G399000 Sobic009G181900--Sobic007G114650 Sobic009G181900--Sobic009G112500 Sobic003G440500 Sobic003G440500 Sobic009G181900--Sobic003G440500 Sobic003G262500 Sobic003G262500 Sobic009G181900--Sobic003G262500 Sobic009G181900--Sobic005G025400 Sobic001G410300 Sobic001G410300 Sobic009G181900--Sobic001G410300 Sobic009G181900--Sobic010G278400 Sobic009G181900--Sobic001G350300 Sobic007G189900 Sobic007G189900 Sobic002G387000--Sobic007G189900 Sobic001G312801 Sobic001G312801 Sobic002G387000--Sobic001G312801 Sobic002G387000--Sobic010G118401 Sobic002G387000--Sobic009G112500 Sobic003G301950 Sobic003G301950 Sobic002G387000--Sobic003G301950 Sobic001G490600 Sobic001G490600 Sobic002G387000--Sobic001G490600 Sobic002G387000--Sobic009G181900 Sobic001G507700 Sobic001G507700 Sobic002G387000--Sobic001G507700 Sobic009G147600 Sobic009G147600 Sobic002G387000--Sobic009G147600 Sobic001G212900 Sobic001G212900 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic002G187900 Sobic002G187900 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic003G263900 Sobic003G263900 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic004G173200 Sobic004G173200 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic005G014400--Sobic003G251900 Sobic001G093732 Sobic001G093732 Sobic005G014400--Sobic001G093732 Sobic004G181000 Sobic004G181000 Sobic005G014400--Sobic004G181000 Sobic001G350800 Sobic001G350800 Sobic005G014400--Sobic001G350800 Sobic006G165501 Sobic006G165501 Sobic005G014400--Sobic006G165501 Sobic005G014400--Sobic009G112500 Sobic005G014400--Sobic005G025400 Sobic008G016800 Sobic008G016800 Sobic005G014400--Sobic008G016800 Sobic001G113400 Sobic001G113400 Sobic005G014400--Sobic001G113400 Sobic009G252600 Sobic009G252600 Sobic003G251900--Sobic009G252600 Sobic003G251900--Sobic004G181000 Sobic003G155800 Sobic003G155800 Sobic003G251900--Sobic003G155800 Sobic003G251900--Sobic005G014400 Sobic010G201444 Sobic010G201444 Sobic003G251900--Sobic010G201444 Sobic003G251900--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic003G251900--Sobic002G206900 Sobic009G199900 Sobic009G199900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic005G025400--Sobic010G242000 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic005G025400--Sobic004G202750 Sobic005G025400--Sobic001G350800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.