Gene annotation
Transcriptome id Sobic.009G149600.1
Synonym Sb09g021380
Functional annotation transmembrane protein 18, putative, expressed
UniProt C5YYM9
Pfam PF14770
Panther DB PTHR22593 PTHR22593:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34350 : -
RAP-DB (Rice) LOC_Os05g35720.1 : transmembrane protein 18, putative, expressed
MaizeGDB (Corn) Zm00025a043858
Brachypodium KQK06073
Barley HORVU1Hr1G074640.1
Wheat TraesCS1A02G270500 , TraesCS1D02G270700 , TraesCS1B02G280800
Populus -


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cDNA sequences
Sobic.009G149600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
2 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
4 Sobic.004G350600 AMP-binding domain containing protein, expressed -
5 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.002G399000 expressed protein -
7 Sobic.007G077466 - -
8 Sobic.009G223900 protein binding protein, putative, expressed -
9 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
10 Sobic.008G016400 - -
11 Sobic.002G085600 - -
12 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
13 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
14 Sobic.004G305300 - -
15 Sobic.009G112500 lipase, putative, expressed -
16 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
17 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
18 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
19 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
20 Sobic.001G140101 - -


Gene co-expression network
sample Sobic009G149600 Sobic009G149600 Sobic001G191300 Sobic001G191300 Sobic009G149600--Sobic001G191300 Sobic001G350300 Sobic001G350300 Sobic009G149600--Sobic001G350300 Sobic010G249600 Sobic010G249600 Sobic009G149600--Sobic010G249600 Sobic004G350600 Sobic004G350600 Sobic009G149600--Sobic004G350600 Sobic006G249600 Sobic006G249600 Sobic009G149600--Sobic006G249600 Sobic002G399000 Sobic002G399000 Sobic009G149600--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic009G149600--Sobic007G077466 Sobic009G223900 Sobic009G223900 Sobic009G149600--Sobic009G223900 Sobic003G155800 Sobic003G155800 Sobic009G149600--Sobic003G155800 Sobic001G191300--Sobic007G077466 Sobic003G118500 Sobic003G118500 Sobic001G191300--Sobic003G118500 Sobic001G191300--Sobic001G350300 Sobic004G305300 Sobic004G305300 Sobic001G191300--Sobic004G305300 Sobic001G191300--Sobic002G399000 Sobic003G362800 Sobic003G362800 Sobic001G191300--Sobic003G362800 Sobic002G085600 Sobic002G085600 Sobic001G191300--Sobic002G085600 Sobic002G001500 Sobic002G001500 Sobic001G191300--Sobic002G001500 Sobic002G110600 Sobic002G110600 Sobic001G191300--Sobic002G110600 Sobic006G170800 Sobic006G170800 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G104100 Sobic001G104100 Sobic001G350300--Sobic001G104100 Sobic002G320700 Sobic002G320700 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic003G440500 Sobic003G440500 Sobic010G249600--Sobic003G440500 Sobic002G398600 Sobic002G398600 Sobic010G249600--Sobic002G398600 Sobic002G377400 Sobic002G377400 Sobic010G249600--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic010G249600--Sobic009G223900 Sobic010G249600--Sobic002G085600 Sobic004G224000 Sobic004G224000 Sobic010G249600--Sobic004G224000 Sobic010G249600--Sobic001G191300 Sobic004G350600--Sobic001G350300 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic004G350600--Sobic001G028500 Sobic004G350600--Sobic006G170800 Sobic009G199900 Sobic009G199900 Sobic004G350600--Sobic009G199900 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic004G350600--Sobic003G118500 Sobic001G212900 Sobic001G212900 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic002G187900 Sobic002G187900 Sobic006G249600--Sobic002G187900 Sobic003G253700 Sobic003G253700 Sobic006G249600--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G249600--Sobic003G155000 Sobic003G263900 Sobic003G263900 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic004G173200 Sobic004G173200 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic002G399000--Sobic001G350300 Sobic002G399000--Sobic004G350600 Sobic002G399000--Sobic001G104100 Sobic002G399000--Sobic001G191300 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic002G399000--Sobic004G305300 Sobic002G399000--Sobic003G118500 Sobic005G025400 Sobic005G025400 Sobic002G399000--Sobic005G025400 Sobic007G077466--Sobic001G191300 Sobic007G077466--Sobic002G001500 Sobic001G503700 Sobic001G503700 Sobic007G077466--Sobic001G503700 Sobic007G077466--Sobic003G118500 Sobic007G077466--Sobic004G305300 Sobic007G077466--Sobic003G362800 Sobic007G077466--Sobic002G110600 Sobic010G000200 Sobic010G000200 Sobic007G077466--Sobic010G000200 Sobic007G077466--Sobic004G173200 Sobic009G223900--Sobic002G001500 Sobic004G181000 Sobic004G181000 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic008G103400 Sobic008G103400 Sobic009G223900--Sobic008G103400 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900
Octagon: transcription factors


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