Gene annotation
Transcriptome id Sobic.002G398600.1
Synonym CYP72B1, Sb02g041330, BAS1, CYP734A1
Functional annotation cytochrome P450 72A1, putative, expressed
UniProt A0A1W0W7J9
Pfam PF00067
Panther DB PTHR24282 PTHR24282:SF41
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K15639; CYP734A1, PHYB activation tagged suppressor 1
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G26710 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os07g45290.1 : cytochrome P450 72A1, putative, expressed
MaizeGDB (Corn) Zm00025a048975
Brachypodium KQK14924
Barley HORVU0Hr1G002600.2 , HORVU0Hr1G002600.1
Wheat TraesCS2A02G139900 , TraesCS2B02G163900 , TraesCS5D02G462500 , TraesCS2A02G139900 , TraesCS7D02G350000 , TraesCS2D02G142600 , TraesCS7B02G254100 , TraesCS7B02G254100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
2 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
3 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
4 Sobic.002G187900 expressed protein -
5 Sobic.009G223900 protein binding protein, putative, expressed -
6 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
7 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
8 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
9 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
10 Sobic.002G110600 regulatory protein, putative, expressed -
11 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
12 Sobic.002G085600 - -
13 Sobic.001G370800 - -
14 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
15 Sobic.001G334400 protein kinase, putative, expressed -
16 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
17 Sobic.001G424650 - -
18 Sobic.003G362800 - -
19 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.006G255200 - -


Gene co-expression network
sample Sobic002G398600 Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic004G173200 Sobic004G173200 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G398600--Sobic002G187900 Sobic009G223900 Sobic009G223900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic003G253700 Sobic003G253700 Sobic006G249600--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic004G173200--Sobic010G000200 Sobic003G262600 Sobic003G262600 Sobic004G173200--Sobic003G262600 Sobic004G173200--Sobic002G398600 Sobic001G370800 Sobic001G370800 Sobic004G173200--Sobic001G370800 Sobic004G173200--Sobic002G187900 Sobic003G362800 Sobic003G362800 Sobic004G173200--Sobic003G362800 Sobic004G173200--Sobic006G249600 Sobic004G173200--Sobic001G212900 Sobic002G001500 Sobic002G001500 Sobic004G173200--Sobic002G001500 Sobic003G263900--Sobic002G187900 Sobic001G038700 Sobic001G038700 Sobic003G263900--Sobic001G038700 Sobic006G255200 Sobic006G255200 Sobic003G263900--Sobic006G255200 Sobic008G142200 Sobic008G142200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic003G263900--Sobic002G398600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic004G072201 Sobic004G072201 Sobic003G263900--Sobic004G072201 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic009G223900--Sobic002G001500 Sobic004G181000 Sobic004G181000 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic003G155800 Sobic003G155800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic001G113400 Sobic001G113400 Sobic009G223900--Sobic001G113400 Sobic009G223900--Sobic003G262600 Sobic008G192900--Sobic008G103400 Sobic008G192900--Sobic002G398600 Sobic008G192900--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic008G192900--Sobic010G012200 Sobic008G192900--Sobic001G370800 Sobic008G192900--Sobic010G000200 Sobic008G192900--Sobic003G362800 Sobic008G192900--Sobic003G262600 Sobic008G192900--Sobic003G155000 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic008G103400--Sobic002G110600 Sobic008G103400--Sobic004G181000 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic008G016800--Sobic002G110600 Sobic008G016800--Sobic001G109400 Sobic008G016800--Sobic008G103400 Sobic008G016800--Sobic002G398600 Sobic008G016800--Sobic001G212900 Sobic008G016800--Sobic006G249600 Sobic008G016800--Sobic003G362800 Sobic001G383200 Sobic001G383200 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.