Gene annotation
Transcriptome id Sobic.001G334400.2
Synonym
Functional annotation protein kinase, putative, expressed
UniProt A0A1Z5S8W2
Pfam PF04564 PF00069 PF12436
Panther DB PTHR27003 PTHR27003:SF19
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45910 : U-box domain-containing protein kinase family protein
RAP-DB (Rice) LOC_Os03g31000.1 : protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT76885
Barley -
Wheat TraesCS4D02G095000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G183650 - -
2 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
3 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
4 Sobic.001G424650 - -
5 Sobic.004G218400 - -
6 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
7 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
8 Sobic.004G072201 - -
9 Sobic.006G255200 - -
10 Sobic.005G110553 - -
11 Sobic.003G304000 peptide transporter PTR2, putative, expressed -
12 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
13 Sobic.002G309300 beta-expansin precursor, putative, expressed -
14 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
15 Sobic.002G127300 - -
16 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
17 Sobic.009G079700 C2 domain containing protein, putative, expressed -
18 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
19 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
20 Sobic.001G370800 - -


Gene co-expression network
sample Sobic001G334400 Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic001G334400--Sobic009G183650 Sobic002G274000 Sobic002G274000 Sobic001G334400--Sobic002G274000 Sobic009G088300 Sobic009G088300 Sobic001G334400--Sobic009G088300 Sobic001G424650 Sobic001G424650 Sobic001G334400--Sobic001G424650 Sobic004G218400 Sobic004G218400 Sobic001G334400--Sobic004G218400 Sobic006G268100 Sobic006G268100 Sobic001G334400--Sobic006G268100 Sobic002G398600 Sobic002G398600 Sobic001G334400--Sobic002G398600 Sobic004G072201 Sobic004G072201 Sobic001G334400--Sobic004G072201 Sobic006G255200 Sobic006G255200 Sobic001G334400--Sobic006G255200 Sobic009G183650--Sobic001G334400 Sobic009G183650--Sobic001G424650 Sobic002G110600 Sobic002G110600 Sobic009G183650--Sobic002G110600 Sobic005G110553 Sobic005G110553 Sobic009G183650--Sobic005G110553 Sobic010G019500 Sobic010G019500 Sobic009G183650--Sobic010G019500 Sobic009G183650--Sobic004G072201 Sobic004G068600 Sobic004G068600 Sobic009G183650--Sobic004G068600 Sobic009G183650--Sobic009G088300 Sobic009G183650--Sobic002G274000 Sobic002G274000--Sobic004G218400 Sobic002G274000--Sobic001G334400 Sobic002G274000--Sobic006G268100 Sobic003G067600 Sobic003G067600 Sobic002G274000--Sobic003G067600 Sobic003G001650 Sobic003G001650 Sobic002G274000--Sobic003G001650 Sobic004G173200 Sobic004G173200 Sobic002G274000--Sobic004G173200 Sobic002G274000--Sobic005G110553 Sobic002G309300 Sobic002G309300 Sobic002G274000--Sobic002G309300 Sobic001G370800 Sobic001G370800 Sobic002G274000--Sobic001G370800 Sobic009G088300--Sobic001G424650 Sobic010G129100 Sobic010G129100 Sobic009G088300--Sobic010G129100 Sobic009G088300--Sobic001G370800 Sobic001G442000 Sobic001G442000 Sobic009G088300--Sobic001G442000 Sobic009G088300--Sobic006G255200 Sobic001G492400 Sobic001G492400 Sobic009G088300--Sobic001G492400 Sobic009G088300--Sobic001G334400 Sobic003G263900 Sobic003G263900 Sobic009G088300--Sobic003G263900 Sobic002G262850 Sobic002G262850 Sobic009G088300--Sobic002G262850 Sobic001G424650--Sobic009G088300 Sobic001G424650--Sobic001G492400 Sobic001G424650--Sobic005G110553 Sobic001G424650--Sobic001G370800 Sobic001G424650--Sobic001G442000 Sobic009G122000 Sobic009G122000 Sobic001G424650--Sobic009G122000 Sobic001G424650--Sobic001G334400 Sobic004G224000 Sobic004G224000 Sobic001G424650--Sobic004G224000 Sobic001G424650--Sobic006G255200 Sobic004G218400--Sobic002G309300 Sobic001G038700 Sobic001G038700 Sobic004G218400--Sobic001G038700 Sobic004G218400--Sobic006G268100 Sobic004G218400--Sobic001G370800 Sobic004G218400--Sobic006G255200 Sobic004G218400--Sobic003G001650 Sobic004G218400--Sobic002G274000 Sobic004G218400--Sobic003G067600 Sobic004G218400--Sobic004G072201 Sobic006G268100--Sobic004G218400 Sobic006G268100--Sobic002G309300 Sobic006G268100--Sobic005G110553 Sobic006G268100--Sobic002G274000 Sobic006G268100--Sobic001G334400 Sobic006G268100--Sobic004G072201 Sobic010G042300 Sobic010G042300 Sobic006G268100--Sobic010G042300 Sobic001G383200 Sobic001G383200 Sobic006G268100--Sobic001G383200 Sobic006G268100--Sobic006G255200 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic002G398600--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G398600--Sobic002G187900 Sobic009G223900 Sobic009G223900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic004G072201--Sobic001G383200 Sobic002G374000 Sobic002G374000 Sobic004G072201--Sobic002G374000 Sobic001G109400 Sobic001G109400 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic006G255200--Sobic001G442000 Sobic004G127600 Sobic004G127600 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800
Octagon: transcription factors


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