Gene annotation
Transcriptome id Sobic.003G263900.1
Synonym Sb03g031730
Functional annotation reticulon domain containing protein, putative, expressed
UniProt A0A1B6Q5G5
Pfam PF02453
Panther DB PTHR10994 PTHR10994:SF85
NCBI CDD KOG1792; Reticulon
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18260 : Reticulon family protein
RAP-DB (Rice) LOC_Os05g47690.1 : reticulon domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044462
Brachypodium KQK09269 , KQK09268
Barley HORVU3Hr1G064240.2
Wheat TraesCS3A02G261500 , TraesCS3B02G294700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G187900 expressed protein -
2 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.006G255200 - -
4 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
5 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
6 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
7 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
8 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
9 Sobic.004G072201 - -
10 Sobic.006G157450 - -
11 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
12 Sobic.009G094200 - -
13 Sobic.001G370800 - -
14 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
15 Sobic.006G134300 - -
16 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
17 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
18 Sobic.002G309300 beta-expansin precursor, putative, expressed -
19 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
20 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic003G263900 Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic003G263900--Sobic002G187900 Sobic001G038700 Sobic001G038700 Sobic003G263900--Sobic001G038700 Sobic006G255200 Sobic006G255200 Sobic003G263900--Sobic006G255200 Sobic008G142200 Sobic008G142200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic004G072201 Sobic004G072201 Sobic003G263900--Sobic004G072201 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic001G109400 Sobic001G109400 Sobic002G187900--Sobic001G109400 Sobic001G212900 Sobic001G212900 Sobic002G187900--Sobic001G212900 Sobic002G187900--Sobic004G227700 Sobic004G173200 Sobic004G173200 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic006G157450 Sobic006G157450 Sobic001G038700--Sobic006G157450 Sobic001G038700--Sobic003G263900 Sobic002G309300 Sobic002G309300 Sobic001G038700--Sobic002G309300 Sobic004G218400 Sobic004G218400 Sobic001G038700--Sobic004G218400 Sobic010G012200 Sobic010G012200 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic001G038700--Sobic004G072201 Sobic009G026600 Sobic009G026600 Sobic001G038700--Sobic009G026600 Sobic001G038700--Sobic008G142200 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic001G442000 Sobic001G442000 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic006G255200--Sobic004G218400 Sobic001G370800 Sobic001G370800 Sobic006G255200--Sobic001G370800 Sobic008G142200--Sobic004G227700 Sobic001G191500 Sobic001G191500 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G190600 Sobic008G190600 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800 Sobic004G127600--Sobic002G187900 Sobic004G127600--Sobic003G263900 Sobic004G127600--Sobic006G255200 Sobic004G127600--Sobic001G442000 Sobic004G127600--Sobic001G212900 Sobic004G127600--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic004G127600--Sobic002G374000 Sobic004G127600--Sobic004G072201 Sobic004G127600--Sobic001G038700 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic009G223900 Sobic009G223900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic003G253700 Sobic003G253700 Sobic006G249600--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450 Sobic004G227700--Sobic008G142200 Sobic004G227700--Sobic002G187900 Sobic004G227700--Sobic009G094200 Sobic004G082600 Sobic004G082600 Sobic004G227700--Sobic004G082600 Sobic004G227700--Sobic003G263900 Sobic004G227700--Sobic003G155000 Sobic003G063400 Sobic003G063400 Sobic004G227700--Sobic003G063400 Sobic006G134300 Sobic006G134300 Sobic004G227700--Sobic006G134300 Sobic004G250400 Sobic004G250400 Sobic004G227700--Sobic004G250400 Sobic001G383200 Sobic001G383200 Sobic004G072201--Sobic001G383200 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600
Octagon: transcription factors


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