Gene annotation
Transcriptome id Sobic.001G442000.1
Synonym ATPAP17, ATACP5, PAP17
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A1B6QPG2
Pfam -
Panther DB PTHR10161 PTHR10161:SF19
NCBI CDD -
KEGG Orthology K14379; tartrate-resistant acid phosphatase type 5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17790 : purple acid phosphatase 17
RAP-DB (Rice) LOC_Os03g13540.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001498
Brachypodium KQK22661 , KQK22660 , KQK22663 , KQK22662
Barley HORVU4Hr1G064380.5 , HORVU4Hr1G064380.7 , HORVU4Hr1G064380.4 , HORVU4Hr1G064380.3 , HORVU4Hr1G064360.1 , HORVU4Hr1G064360.2
Wheat TraesCS4D02G231400 , TraesCS4A02G073800 , TraesCS4B02G230000 , TraesCS4B02G230000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G255200 - -
2 Sobic.004G072201 - -
3 Sobic.001G370800 - -
4 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
5 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
6 Sobic.002G309300 beta-expansin precursor, putative, expressed -
7 Sobic.009G026600 - -
8 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.002G187900 expressed protein -
10 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
11 Sobic.001G424650 - -
12 Sobic.004G218400 - -
13 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
14 Sobic.007G183600 expressed protein -
15 Sobic.002G127300 - -
16 Sobic.002G374000 - -
17 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
18 Sobic.010G129100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
19 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
20 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin


Gene co-expression network
sample Sobic001G442000 Sobic001G442000 Sobic006G255200 Sobic006G255200 Sobic001G442000--Sobic006G255200 Sobic004G072201 Sobic004G072201 Sobic001G442000--Sobic004G072201 Sobic001G370800 Sobic001G370800 Sobic001G442000--Sobic001G370800 Sobic004G127600 Sobic004G127600 Sobic001G442000--Sobic004G127600 Sobic009G088300 Sobic009G088300 Sobic001G442000--Sobic009G088300 Sobic002G309300 Sobic002G309300 Sobic001G442000--Sobic002G309300 Sobic009G026600 Sobic009G026600 Sobic001G442000--Sobic009G026600 Sobic001G038700 Sobic001G038700 Sobic001G442000--Sobic001G038700 Sobic002G187900 Sobic002G187900 Sobic001G442000--Sobic002G187900 Sobic006G255200--Sobic002G187900 Sobic003G263900 Sobic003G263900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic006G255200--Sobic001G109400 Sobic004G218400 Sobic004G218400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800 Sobic001G383200 Sobic001G383200 Sobic004G072201--Sobic001G383200 Sobic002G374000 Sobic002G374000 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic001G370800--Sobic009G026600 Sobic004G173200 Sobic004G173200 Sobic001G370800--Sobic004G173200 Sobic001G370800--Sobic001G038700 Sobic001G370800--Sobic001G442000 Sobic001G370800--Sobic002G309300 Sobic001G370800--Sobic009G088300 Sobic001G370800--Sobic004G218400 Sobic001G370800--Sobic006G255200 Sobic001G370800--Sobic003G263900 Sobic004G127600--Sobic002G187900 Sobic004G127600--Sobic003G263900 Sobic004G127600--Sobic006G255200 Sobic004G127600--Sobic001G442000 Sobic001G212900 Sobic001G212900 Sobic004G127600--Sobic001G212900 Sobic004G127600--Sobic001G109400 Sobic004G127600--Sobic002G374000 Sobic004G127600--Sobic004G072201 Sobic004G127600--Sobic001G038700 Sobic001G424650 Sobic001G424650 Sobic009G088300--Sobic001G424650 Sobic010G129100 Sobic010G129100 Sobic009G088300--Sobic010G129100 Sobic009G088300--Sobic001G370800 Sobic009G088300--Sobic001G442000 Sobic009G088300--Sobic006G255200 Sobic001G492400 Sobic001G492400 Sobic009G088300--Sobic001G492400 Sobic001G334400 Sobic001G334400 Sobic009G088300--Sobic001G334400 Sobic009G088300--Sobic003G263900 Sobic002G262850 Sobic002G262850 Sobic009G088300--Sobic002G262850 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic002G309300--Sobic001G370800 Sobic002G309300--Sobic009G026600 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300 Sobic009G026600--Sobic001G370800 Sobic003G063400 Sobic003G063400 Sobic009G026600--Sobic003G063400 Sobic005G027350 Sobic005G027350 Sobic009G026600--Sobic005G027350 Sobic009G026600--Sobic001G038700 Sobic004G250400 Sobic004G250400 Sobic009G026600--Sobic004G250400 Sobic001G001800 Sobic001G001800 Sobic009G026600--Sobic001G001800 Sobic009G026600--Sobic008G037300 Sobic009G026600--Sobic002G309300 Sobic010G012200 Sobic010G012200 Sobic009G026600--Sobic010G012200 Sobic006G157450 Sobic006G157450 Sobic001G038700--Sobic006G157450 Sobic001G038700--Sobic003G263900 Sobic001G038700--Sobic002G309300 Sobic001G038700--Sobic004G218400 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic001G038700--Sobic004G072201 Sobic001G038700--Sobic009G026600 Sobic008G142200 Sobic008G142200 Sobic001G038700--Sobic008G142200 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic006G249600 Sobic006G249600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G398600 Sobic002G398600 Sobic002G187900--Sobic002G398600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.