Gene annotation
Transcriptome id Sobic.001G383200.1,Sobic.001G383200.3
Synonym Sb01g036350
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
bromodomain domain containing protein, expressed
UniProt A0A1Z5SA08 , A0A1Z5S9R4
Pfam PF00439
Panther DB PTHR22881 PTHR22881:SF15 PTHR22881:SF15 PTHR22881
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G76380 : DNA-binding bromodomain-containing protein
RAP-DB (Rice) LOC_Os03g21450.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002320 , Zm00025a002321
Brachypodium PNT77476
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072201 - -
2 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.002G374000 - -
4 Sobic.002G309300 beta-expansin precursor, putative, expressed -
5 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
6 Sobic.006G157450 - -
7 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
9 Sobic.006G255200 - -
10 Sobic.004G315400 cation efflux family protein, putative, expressed -
11 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
12 Sobic.007G183600 expressed protein -
13 Sobic.010G042300 DTA2, putative, expressed -
14 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
15 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
16 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
17 Sobic.007G075600 pectinesterase, putative, expressed -
18 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
19 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -


Gene co-expression network
sample Sobic001G383200 Sobic001G383200 Sobic004G072201 Sobic004G072201 Sobic001G383200--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic001G383200--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic001G383200--Sobic002G374000 Sobic002G309300 Sobic002G309300 Sobic001G383200--Sobic002G309300 Sobic003G263900 Sobic003G263900 Sobic001G383200--Sobic003G263900 Sobic006G157450 Sobic006G157450 Sobic001G383200--Sobic006G157450 Sobic001G038700 Sobic001G038700 Sobic001G383200--Sobic001G038700 Sobic008G103400 Sobic008G103400 Sobic001G383200--Sobic008G103400 Sobic006G255200 Sobic006G255200 Sobic001G383200--Sobic006G255200 Sobic004G072201--Sobic001G383200 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic001G212900 Sobic001G212900 Sobic001G109400--Sobic001G212900 Sobic001G109400--Sobic004G072201 Sobic001G109400--Sobic002G374000 Sobic002G187900 Sobic002G187900 Sobic001G109400--Sobic002G187900 Sobic001G109400--Sobic001G383200 Sobic006G249600 Sobic006G249600 Sobic001G109400--Sobic006G249600 Sobic001G109400--Sobic006G255200 Sobic004G315400 Sobic004G315400 Sobic001G109400--Sobic004G315400 Sobic008G016800 Sobic008G016800 Sobic001G109400--Sobic008G016800 Sobic002G374000--Sobic004G072201 Sobic002G374000--Sobic001G109400 Sobic002G374000--Sobic004G315400 Sobic002G374000--Sobic001G212900 Sobic002G374000--Sobic001G383200 Sobic004G127600 Sobic004G127600 Sobic002G374000--Sobic004G127600 Sobic002G374000--Sobic007G183600 Sobic003G069601 Sobic003G069601 Sobic002G374000--Sobic003G069601 Sobic010G012200 Sobic010G012200 Sobic002G374000--Sobic010G012200 Sobic004G218400 Sobic004G218400 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic001G370800 Sobic001G370800 Sobic002G309300--Sobic001G370800 Sobic009G026600 Sobic009G026600 Sobic002G309300--Sobic009G026600 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic008G142200 Sobic008G142200 Sobic003G263900--Sobic008G142200 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201 Sobic006G157450--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic001G520000 Sobic001G520000 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic003G253700 Sobic003G253700 Sobic006G157450--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G157450--Sobic003G155000 Sobic001G483001 Sobic001G483001 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic001G038700--Sobic006G157450 Sobic001G038700--Sobic003G263900 Sobic001G038700--Sobic002G309300 Sobic001G038700--Sobic004G218400 Sobic001G038700--Sobic010G012200 Sobic001G038700--Sobic008G170800 Sobic001G038700--Sobic004G072201 Sobic001G038700--Sobic009G026600 Sobic001G038700--Sobic008G142200 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic003G362800 Sobic003G362800 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G103400--Sobic008G016800 Sobic008G103400--Sobic004G315400 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800
Octagon: transcription factors


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