Gene annotation
Transcriptome id Sobic.001G038700.1,Sobic.001G038700.2
Synonym Sb01g003560
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt A0A1B6QH77 , C5WV53
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF160
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38480 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os03g60250.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016453
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157450 - -
2 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
3 Sobic.002G309300 beta-expansin precursor, putative, expressed -
4 Sobic.004G218400 - -
5 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
6 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.004G072201 - -
8 Sobic.009G026600 - -
9 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.001G370800 - -
11 Sobic.001G191500 expressed protein -
12 Sobic.002G187900 expressed protein -
13 Sobic.006G255200 - -
14 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
15 Sobic.001G090700 expressed protein -
16 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
17 Sobic.001G001800 expressed protein -
18 Sobic.007G075600 pectinesterase, putative, expressed -
19 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
20 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5


Gene co-expression network
sample Sobic001G038700 Sobic001G038700 Sobic006G157450 Sobic006G157450 Sobic001G038700--Sobic006G157450 Sobic003G263900 Sobic003G263900 Sobic001G038700--Sobic003G263900 Sobic002G309300 Sobic002G309300 Sobic001G038700--Sobic002G309300 Sobic004G218400 Sobic004G218400 Sobic001G038700--Sobic004G218400 Sobic010G012200 Sobic010G012200 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic004G072201 Sobic004G072201 Sobic001G038700--Sobic004G072201 Sobic009G026600 Sobic009G026600 Sobic001G038700--Sobic009G026600 Sobic008G142200 Sobic008G142200 Sobic001G038700--Sobic008G142200 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic001G520000 Sobic001G520000 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic003G253700 Sobic003G253700 Sobic006G157450--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic006G157450--Sobic003G155000 Sobic001G483001 Sobic001G483001 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic002G187900 Sobic002G187900 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic006G255200 Sobic006G255200 Sobic003G263900--Sobic006G255200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic001G370800 Sobic001G370800 Sobic002G309300--Sobic001G370800 Sobic002G309300--Sobic009G026600 Sobic001G442000 Sobic001G442000 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300 Sobic004G218400--Sobic002G309300 Sobic004G218400--Sobic001G038700 Sobic004G218400--Sobic006G268100 Sobic004G218400--Sobic001G370800 Sobic004G218400--Sobic006G255200 Sobic003G001650 Sobic003G001650 Sobic004G218400--Sobic003G001650 Sobic002G274000 Sobic002G274000 Sobic004G218400--Sobic002G274000 Sobic003G067600 Sobic003G067600 Sobic004G218400--Sobic003G067600 Sobic004G218400--Sobic004G072201 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic001G383200 Sobic001G383200 Sobic004G072201--Sobic001G383200 Sobic002G374000 Sobic002G374000 Sobic004G072201--Sobic002G374000 Sobic001G109400 Sobic001G109400 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic009G026600--Sobic001G370800 Sobic003G063400 Sobic003G063400 Sobic009G026600--Sobic003G063400 Sobic005G027350 Sobic005G027350 Sobic009G026600--Sobic005G027350 Sobic009G026600--Sobic001G038700 Sobic004G250400 Sobic004G250400 Sobic009G026600--Sobic004G250400 Sobic001G001800 Sobic001G001800 Sobic009G026600--Sobic001G001800 Sobic009G026600--Sobic008G037300 Sobic009G026600--Sobic002G309300 Sobic009G026600--Sobic010G012200 Sobic008G142200--Sobic004G227700 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800
Octagon: transcription factors


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