Gene annotation
Transcriptome id Sobic.004G218400.1
Synonym
Functional annotation -
UniProt A0A194YQZ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G218400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G309300 beta-expansin precursor, putative, expressed -
2 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
4 Sobic.001G370800 - -
5 Sobic.006G255200 - -
6 Sobic.003G001650 - -
7 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
8 Sobic.003G067600 receptor kinase, putative, expressed -
9 Sobic.004G072201 - -
10 Sobic.002G127300 - -
11 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
13 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
14 Sobic.001G334400 protein kinase, putative, expressed -
15 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
16 Sobic.010G042300 DTA2, putative, expressed -
17 Sobic.001G454600 expressed protein -
18 Sobic.008G037300 RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
19 Sobic.002G187900 expressed protein -
20 Sobic.009G026600 - -


Gene co-expression network
sample Sobic004G218400 Sobic004G218400 Sobic002G309300 Sobic002G309300 Sobic004G218400--Sobic002G309300 Sobic001G038700 Sobic001G038700 Sobic004G218400--Sobic001G038700 Sobic006G268100 Sobic006G268100 Sobic004G218400--Sobic006G268100 Sobic001G370800 Sobic001G370800 Sobic004G218400--Sobic001G370800 Sobic006G255200 Sobic006G255200 Sobic004G218400--Sobic006G255200 Sobic003G001650 Sobic003G001650 Sobic004G218400--Sobic003G001650 Sobic002G274000 Sobic002G274000 Sobic004G218400--Sobic002G274000 Sobic003G067600 Sobic003G067600 Sobic004G218400--Sobic003G067600 Sobic004G072201 Sobic004G072201 Sobic004G218400--Sobic004G072201 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic002G309300--Sobic006G268100 Sobic002G309300--Sobic001G370800 Sobic009G026600 Sobic009G026600 Sobic002G309300--Sobic009G026600 Sobic001G442000 Sobic001G442000 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300 Sobic006G157450 Sobic006G157450 Sobic001G038700--Sobic006G157450 Sobic003G263900 Sobic003G263900 Sobic001G038700--Sobic003G263900 Sobic001G038700--Sobic002G309300 Sobic001G038700--Sobic004G218400 Sobic010G012200 Sobic010G012200 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic001G038700--Sobic004G072201 Sobic001G038700--Sobic009G026600 Sobic008G142200 Sobic008G142200 Sobic001G038700--Sobic008G142200 Sobic006G268100--Sobic004G218400 Sobic006G268100--Sobic002G309300 Sobic005G110553 Sobic005G110553 Sobic006G268100--Sobic005G110553 Sobic006G268100--Sobic002G274000 Sobic001G334400 Sobic001G334400 Sobic006G268100--Sobic001G334400 Sobic006G268100--Sobic004G072201 Sobic010G042300 Sobic010G042300 Sobic006G268100--Sobic010G042300 Sobic001G383200 Sobic001G383200 Sobic006G268100--Sobic001G383200 Sobic006G268100--Sobic006G255200 Sobic001G370800--Sobic009G026600 Sobic004G173200 Sobic004G173200 Sobic001G370800--Sobic004G173200 Sobic001G370800--Sobic001G038700 Sobic001G370800--Sobic001G442000 Sobic001G370800--Sobic002G309300 Sobic009G088300 Sobic009G088300 Sobic001G370800--Sobic009G088300 Sobic001G370800--Sobic004G218400 Sobic001G370800--Sobic006G255200 Sobic001G370800--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic006G255200--Sobic001G442000 Sobic004G127600 Sobic004G127600 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic006G255200--Sobic001G109400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800 Sobic003G362800 Sobic003G362800 Sobic003G001650--Sobic003G362800 Sobic003G001650--Sobic004G218400 Sobic003G001650--Sobic008G170800 Sobic003G001650--Sobic010G042300 Sobic001G454600 Sobic001G454600 Sobic003G001650--Sobic001G454600 Sobic002G001500 Sobic002G001500 Sobic003G001650--Sobic002G001500 Sobic008G192900 Sobic008G192900 Sobic003G001650--Sobic008G192900 Sobic008G103400 Sobic008G103400 Sobic003G001650--Sobic008G103400 Sobic004G144300 Sobic004G144300 Sobic003G001650--Sobic004G144300 Sobic002G274000--Sobic004G218400 Sobic002G274000--Sobic001G334400 Sobic002G274000--Sobic006G268100 Sobic002G274000--Sobic003G067600 Sobic002G274000--Sobic003G001650 Sobic002G274000--Sobic004G173200 Sobic002G274000--Sobic005G110553 Sobic002G274000--Sobic002G309300 Sobic002G274000--Sobic001G370800 Sobic003G067600--Sobic004G218400 Sobic002G228300 Sobic002G228300 Sobic003G067600--Sobic002G228300 Sobic003G067600--Sobic002G274000 Sobic006G138300 Sobic006G138300 Sobic003G067600--Sobic006G138300 Sobic003G067600--Sobic001G370800 Sobic003G067600--Sobic001G038700 Sobic003G067600--Sobic001G334400 Sobic003G067600--Sobic006G268100 Sobic003G304000 Sobic003G304000 Sobic003G067600--Sobic003G304000 Sobic004G072201--Sobic001G383200 Sobic002G374000 Sobic002G374000 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600
Octagon: transcription factors


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