Gene annotation
Transcriptome id Sobic.010G042300.1
Synonym Sb10g003730
Functional annotation DTA2, putative, expressed
UniProt C5Z4C1
Pfam PF05686
Panther DB PTHR12203 PTHR12203:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23850 : Arabidopsis thaliana protein of unknown function (DUF821)
RAP-DB (Rice) LOC_Os06g05940.1 : DTA2, putative, expressed
MaizeGDB (Corn) Zm00025a050000 , Zm00025a055411 , Zm00025a056589 , Zm00025a033652
Brachypodium PNT77349 , KQK07501 , KQK03373 , PNT77348 , KQJ83775 , KQK21562 , PNT77350
Barley HORVU2Hr1G091800.12 , HORVU1Hr1G020420.12 , HORVU1Hr1G020420.13 , HORVU2Hr1G091800.20 , HORVU1Hr1G020420.11 , HORVU1Hr1G020420.10 , HORVU1Hr1G020420.16 , HORVU1Hr1G020420.15 , HORVU1Hr1G020420.14 , HORVU2Hr1G091800.8 , HORVU2Hr1G091800.9 , HORVU2Hr1G091800.7 , HORVU1Hr1G020420.2 , HORVU1Hr1G020420.8 , HORVU2Hr1G091800.14 , HORVU2Hr1G091800.15 , HORVU2Hr1G091800.16 , HORVU0Hr1G021480.4 , HORVU0Hr1G021480.3 , HORVU0Hr1G021480.2 , HORVU0Hr1G021480.1 , HORVU2Hr1G091800.13 , HORVU2Hr1G091800.18 , HORVU2Hr1G091800.19 , HORVU7Hr1G078570.1 , HORVU1Hr1G020420.9 , HORVU2Hr1G091800.17 , HORVU1Hr1G020420.3 , HORVU2Hr1G091800.10 , HORVU1Hr1G020420.1 , HORVU1Hr1G020420.4 , HORVU1Hr1G020420.7 , HORVU1Hr1G020420.6 , HORVU1Hr1G020420.5 , HORVU2Hr1G091800.11
Wheat TraesCS2D02G365700 , TraesCS7B02G317100 , TraesCS7A02G328300 , TraesCS1D02G098300 , TraesCS1D02G098300 , TraesCS1A02G089800 , TraesCS2A02G369000 , TraesCS7A02G328500 , TraesCS7B02G229100 , TraesCS7B02G229100 , TraesCS7D02G325000 , TraesCS1B02G117800 , TraesCS7D02G410200 , TraesCS7D02G325000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
2 Sobic.001G090700 expressed protein -
3 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
5 Sobic.003G001650 - -
6 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
7 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
8 Sobic.004G072201 - -
9 Sobic.002G309300 beta-expansin precursor, putative, expressed -
10 Sobic.004G218400 - -
11 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
13 Sobic.001G483001 - -
14 Sobic.007G075600 pectinesterase, putative, expressed -
15 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
16 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.005G228650 - -
18 Sobic.001G460900 expressed protein -
19 Sobic.006G157450 - -
20 Sobic.002G086900 receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic010G042300 Sobic010G042300 Sobic006G279100 Sobic006G279100 Sobic010G042300--Sobic006G279100 Sobic001G090700 Sobic001G090700 Sobic010G042300--Sobic001G090700 Sobic008G170800 Sobic008G170800 Sobic010G042300--Sobic008G170800 Sobic008G103400 Sobic008G103400 Sobic010G042300--Sobic008G103400 Sobic003G001650 Sobic003G001650 Sobic010G042300--Sobic003G001650 Sobic002G208700 Sobic002G208700 Sobic010G042300--Sobic002G208700 Sobic001G383200 Sobic001G383200 Sobic010G042300--Sobic001G383200 Sobic004G072201 Sobic004G072201 Sobic010G042300--Sobic004G072201 Sobic002G309300 Sobic002G309300 Sobic010G042300--Sobic002G309300 Sobic006G279100--Sobic010G042300 Sobic005G070951 Sobic005G070951 Sobic006G279100--Sobic005G070951 Sobic001G483001 Sobic001G483001 Sobic006G279100--Sobic001G483001 Sobic006G279100--Sobic001G090700 Sobic006G279100--Sobic008G170800 Sobic006G279100--Sobic002G208700 Sobic001G460900 Sobic001G460900 Sobic006G279100--Sobic001G460900 Sobic005G228650 Sobic005G228650 Sobic006G279100--Sobic005G228650 Sobic001G150100 Sobic001G150100 Sobic006G279100--Sobic001G150100 Sobic001G090700--Sobic008G170800 Sobic001G454600 Sobic001G454600 Sobic001G090700--Sobic001G454600 Sobic001G090700--Sobic010G042300 Sobic001G038700 Sobic001G038700 Sobic001G090700--Sobic001G038700 Sobic001G090700--Sobic006G279100 Sobic009G026600 Sobic009G026600 Sobic001G090700--Sobic009G026600 Sobic001G090700--Sobic001G460900 Sobic010G012200 Sobic010G012200 Sobic001G090700--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic001G090700--Sobic008G190600 Sobic008G170800--Sobic001G090700 Sobic006G157450 Sobic006G157450 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic003G155000 Sobic003G155000 Sobic008G170800--Sobic003G155000 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic003G253700 Sobic003G253700 Sobic008G170800--Sobic003G253700 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic003G362800 Sobic003G362800 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic003G001650--Sobic003G362800 Sobic004G218400 Sobic004G218400 Sobic003G001650--Sobic004G218400 Sobic003G001650--Sobic008G170800 Sobic003G001650--Sobic010G042300 Sobic003G001650--Sobic001G454600 Sobic003G001650--Sobic002G001500 Sobic003G001650--Sobic008G192900 Sobic003G001650--Sobic008G103400 Sobic004G144300 Sobic004G144300 Sobic003G001650--Sobic004G144300 Sobic006G215650 Sobic006G215650 Sobic002G208700--Sobic006G215650 Sobic002G208700--Sobic010G042300 Sobic002G208700--Sobic006G279100 Sobic003G329300 Sobic003G329300 Sobic002G208700--Sobic003G329300 Sobic007G149500 Sobic007G149500 Sobic002G208700--Sobic007G149500 Sobic002G208700--Sobic001G090700 Sobic002G302800 Sobic002G302800 Sobic002G208700--Sobic002G302800 Sobic007G137100 Sobic007G137100 Sobic002G208700--Sobic007G137100 Sobic001G187900 Sobic001G187900 Sobic002G208700--Sobic001G187900 Sobic001G383200--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic001G383200--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic001G383200--Sobic002G374000 Sobic001G383200--Sobic002G309300 Sobic003G263900 Sobic003G263900 Sobic001G383200--Sobic003G263900 Sobic001G383200--Sobic006G157450 Sobic001G383200--Sobic001G038700 Sobic001G383200--Sobic008G103400 Sobic006G255200 Sobic006G255200 Sobic001G383200--Sobic006G255200 Sobic004G072201--Sobic001G383200 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic001G370800 Sobic001G370800 Sobic002G309300--Sobic001G370800 Sobic002G309300--Sobic009G026600 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.