Gene annotation
Transcriptome id Sobic.003G067600.1
Synonym Sb03g005740
Functional annotation receptor kinase, putative, expressed
UniProt A0A1B6Q1P7
Pfam PF08263 PF00560 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF187
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g05870.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a035651 , Zm00025a023417 , Zm00025a023418
Brachypodium KQK19388
Barley HORVU5Hr1G085140.1 , HORVU5Hr1G087090.5 , HORVU5Hr1G087090.4 , HORVU5Hr1G087090.1 , HORVU5Hr1G087090.3 , HORVU5Hr1G087090.2 , HORVU5Hr1G041390.1 , HORVU5Hr1G041390.2 , HORVU5Hr1G085140.3 , HORVU5Hr1G085140.2
Wheat TraesCS3B02G588300 , TraesCS1B02G004700 , TraesCS6B02G003800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G218400 - -
2 Sobic.002G228300 - -
3 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
4 Sobic.006G138300 EF hand family protein, putative, expressed -
5 Sobic.001G370800 - -
6 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.001G334400 protein kinase, putative, expressed -
8 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
9 Sobic.003G304000 peptide transporter PTR2, putative, expressed -
10 Sobic.003G001650 - -
11 Sobic.001G454600 expressed protein -
12 Sobic.002G309300 beta-expansin precursor, putative, expressed -
13 Sobic.002G127300 - -
14 Sobic.005G182100 Leucine Rich Repeat family protein, expressed -
15 Sobic.008G037300 RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
16 Sobic.002G206900 GEX2, putative, expressed -
17 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
18 Sobic.001G239000 expressed protein -
19 Sobic.005G068000 expressed protein -
20 Sobic.001G061300 - -


Gene co-expression network
sample Sobic003G067600 Sobic003G067600 Sobic004G218400 Sobic004G218400 Sobic003G067600--Sobic004G218400 Sobic002G228300 Sobic002G228300 Sobic003G067600--Sobic002G228300 Sobic002G274000 Sobic002G274000 Sobic003G067600--Sobic002G274000 Sobic006G138300 Sobic006G138300 Sobic003G067600--Sobic006G138300 Sobic001G370800 Sobic001G370800 Sobic003G067600--Sobic001G370800 Sobic001G038700 Sobic001G038700 Sobic003G067600--Sobic001G038700 Sobic001G334400 Sobic001G334400 Sobic003G067600--Sobic001G334400 Sobic006G268100 Sobic006G268100 Sobic003G067600--Sobic006G268100 Sobic003G304000 Sobic003G304000 Sobic003G067600--Sobic003G304000 Sobic002G309300 Sobic002G309300 Sobic004G218400--Sobic002G309300 Sobic004G218400--Sobic001G038700 Sobic004G218400--Sobic006G268100 Sobic004G218400--Sobic001G370800 Sobic006G255200 Sobic006G255200 Sobic004G218400--Sobic006G255200 Sobic003G001650 Sobic003G001650 Sobic004G218400--Sobic003G001650 Sobic004G218400--Sobic002G274000 Sobic004G218400--Sobic003G067600 Sobic004G072201 Sobic004G072201 Sobic004G218400--Sobic004G072201 Sobic002G228300--Sobic003G067600 Sobic005G068000 Sobic005G068000 Sobic002G228300--Sobic005G068000 Sobic001G239000 Sobic001G239000 Sobic002G228300--Sobic001G239000 Sobic003G124400 Sobic003G124400 Sobic002G228300--Sobic003G124400 Sobic002G228300--Sobic004G218400 Sobic010G129100 Sobic010G129100 Sobic002G228300--Sobic010G129100 Sobic009G037050 Sobic009G037050 Sobic002G228300--Sobic009G037050 Sobic008G037300 Sobic008G037300 Sobic002G228300--Sobic008G037300 Sobic002G127300 Sobic002G127300 Sobic002G228300--Sobic002G127300 Sobic002G274000--Sobic004G218400 Sobic002G274000--Sobic001G334400 Sobic002G274000--Sobic006G268100 Sobic002G274000--Sobic003G067600 Sobic002G274000--Sobic003G001650 Sobic004G173200 Sobic004G173200 Sobic002G274000--Sobic004G173200 Sobic005G110553 Sobic005G110553 Sobic002G274000--Sobic005G110553 Sobic002G274000--Sobic002G309300 Sobic002G274000--Sobic001G370800 Sobic006G138300--Sobic003G067600 Sobic006G138300--Sobic004G173200 Sobic010G000200 Sobic010G000200 Sobic006G138300--Sobic010G000200 Sobic003G262600 Sobic003G262600 Sobic006G138300--Sobic003G262600 Sobic002G206900 Sobic002G206900 Sobic006G138300--Sobic002G206900 Sobic004G127600 Sobic004G127600 Sobic006G138300--Sobic004G127600 Sobic006G138300--Sobic001G370800 Sobic006G138300--Sobic004G218400 Sobic006G138300--Sobic002G274000 Sobic009G026600 Sobic009G026600 Sobic001G370800--Sobic009G026600 Sobic001G370800--Sobic004G173200 Sobic001G370800--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic001G370800--Sobic001G442000 Sobic001G370800--Sobic002G309300 Sobic009G088300 Sobic009G088300 Sobic001G370800--Sobic009G088300 Sobic001G370800--Sobic004G218400 Sobic001G370800--Sobic006G255200 Sobic003G263900 Sobic003G263900 Sobic001G370800--Sobic003G263900 Sobic006G157450 Sobic006G157450 Sobic001G038700--Sobic006G157450 Sobic001G038700--Sobic003G263900 Sobic001G038700--Sobic002G309300 Sobic001G038700--Sobic004G218400 Sobic010G012200 Sobic010G012200 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic001G038700--Sobic004G072201 Sobic001G038700--Sobic009G026600 Sobic008G142200 Sobic008G142200 Sobic001G038700--Sobic008G142200 Sobic009G183650 Sobic009G183650 Sobic001G334400--Sobic009G183650 Sobic001G334400--Sobic002G274000 Sobic001G334400--Sobic009G088300 Sobic001G424650 Sobic001G424650 Sobic001G334400--Sobic001G424650 Sobic001G334400--Sobic004G218400 Sobic001G334400--Sobic006G268100 Sobic002G398600 Sobic002G398600 Sobic001G334400--Sobic002G398600 Sobic001G334400--Sobic004G072201 Sobic001G334400--Sobic006G255200 Sobic006G268100--Sobic004G218400 Sobic006G268100--Sobic002G309300 Sobic006G268100--Sobic005G110553 Sobic006G268100--Sobic002G274000 Sobic006G268100--Sobic001G334400 Sobic006G268100--Sobic004G072201 Sobic010G042300 Sobic010G042300 Sobic006G268100--Sobic010G042300 Sobic001G383200 Sobic001G383200 Sobic006G268100--Sobic001G383200 Sobic006G268100--Sobic006G255200 Sobic003G304000--Sobic001G334400 Sobic003G304000--Sobic004G218400 Sobic003G304000--Sobic002G274000 Sobic003G304000--Sobic003G001650 Sobic003G304000--Sobic003G067600 Sobic003G304000--Sobic006G268100 Sobic003G304000--Sobic010G042300 Sobic003G304000--Sobic009G183650 Sobic003G304000--Sobic002G127300
Octagon: transcription factors


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