Gene annotation
Transcriptome id Sobic.005G182100.2
Synonym Sb05g024060, RPS3, RPM1
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1Z5RJA0
Pfam PF13191
Panther DB PTHR23155 PTHR23155:SF571
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g39290.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G137100 - -
2 Sobic.003G329300 disease resistance RPP13-like protein 1, putative, expressed -
3 Sobic.007G016200 expressed protein -
4 Sobic.004G203633 - -
5 Sobic.002G033200 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
6 Sobic.004G118300 OsFBD15 - F-box and FBD domain containing protein, expressed -
7 Sobic.001G090700 expressed protein -
8 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -
9 Sobic.009G137401 - -
10 Sobic.007G194000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.010G054150 - -
12 Sobic.001G454600 expressed protein -
13 Sobic.001G187900 disease resistance protein, putative, expressed -
14 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.001G093732 - -
16 Sobic.002G206900 GEX2, putative, expressed -
17 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
18 Sobic.002G171901 - -
19 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.001G191500 expressed protein -


Gene co-expression network
sample Sobic005G182100 Sobic005G182100 Sobic007G137100 Sobic007G137100 Sobic005G182100--Sobic007G137100 Sobic003G329300 Sobic003G329300 Sobic005G182100--Sobic003G329300 Sobic007G016200 Sobic007G016200 Sobic005G182100--Sobic007G016200 Sobic004G203633 Sobic004G203633 Sobic005G182100--Sobic004G203633 Sobic002G033200 Sobic002G033200 Sobic005G182100--Sobic002G033200 Sobic004G118300 Sobic004G118300 Sobic005G182100--Sobic004G118300 Sobic001G090700 Sobic001G090700 Sobic005G182100--Sobic001G090700 Sobic010G274700 Sobic010G274700 Sobic005G182100--Sobic010G274700 Sobic009G137401 Sobic009G137401 Sobic005G182100--Sobic009G137401 Sobic007G137100--Sobic003G329300 Sobic007G137100--Sobic005G182100 Sobic008G085800 Sobic008G085800 Sobic007G137100--Sobic008G085800 Sobic002G171901 Sobic002G171901 Sobic007G137100--Sobic002G171901 Sobic003G358150 Sobic003G358150 Sobic007G137100--Sobic003G358150 Sobic007G174500 Sobic007G174500 Sobic007G137100--Sobic007G174500 Sobic003G399200 Sobic003G399200 Sobic007G137100--Sobic003G399200 Sobic003G335000 Sobic003G335000 Sobic007G137100--Sobic003G335000 Sobic007G137100--Sobic004G118300 Sobic003G329300--Sobic007G137100 Sobic003G329300--Sobic008G085800 Sobic003G329300--Sobic010G274700 Sobic009G176100 Sobic009G176100 Sobic003G329300--Sobic009G176100 Sobic003G329300--Sobic007G174500 Sobic003G329300--Sobic002G171901 Sobic003G329300--Sobic005G182100 Sobic003G329300--Sobic003G358150 Sobic003G329300--Sobic002G033200 Sobic002G226200 Sobic002G226200 Sobic007G016200--Sobic002G226200 Sobic003G267600 Sobic003G267600 Sobic007G016200--Sobic003G267600 Sobic007G016200--Sobic005G182100 Sobic007G078900 Sobic007G078900 Sobic007G016200--Sobic007G078900 Sobic001G245100 Sobic001G245100 Sobic007G016200--Sobic001G245100 Sobic001G191500 Sobic001G191500 Sobic007G016200--Sobic001G191500 Sobic007G016200--Sobic007G137100 Sobic009G252500 Sobic009G252500 Sobic007G016200--Sobic009G252500 Sobic010G054150 Sobic010G054150 Sobic007G016200--Sobic010G054150 Sobic007G155950 Sobic007G155950 Sobic004G203633--Sobic007G155950 Sobic007G174000 Sobic007G174000 Sobic004G203633--Sobic007G174000 Sobic004G203633--Sobic003G329300 Sobic004G203633--Sobic010G274700 Sobic004G203633--Sobic005G182100 Sobic004G203633--Sobic008G085800 Sobic004G203633--Sobic003G335000 Sobic004G203633--Sobic007G137100 Sobic004G203633--Sobic007G174500 Sobic002G033200--Sobic004G118300 Sobic002G033200--Sobic003G329300 Sobic004G030850 Sobic004G030850 Sobic002G033200--Sobic004G030850 Sobic004G117850 Sobic004G117850 Sobic002G033200--Sobic004G117850 Sobic006G111000 Sobic006G111000 Sobic002G033200--Sobic006G111000 Sobic002G033200--Sobic009G137401 Sobic008G113200 Sobic008G113200 Sobic002G033200--Sobic008G113200 Sobic010G088100 Sobic010G088100 Sobic002G033200--Sobic010G088100 Sobic002G033200--Sobic001G090700 Sobic004G118300--Sobic002G033200 Sobic004G118300--Sobic004G117850 Sobic004G118300--Sobic003G329300 Sobic007G203800 Sobic007G203800 Sobic004G118300--Sobic007G203800 Sobic004G118300--Sobic007G137100 Sobic004G118300--Sobic006G111000 Sobic004G118300--Sobic002G171901 Sobic007G225050 Sobic007G225050 Sobic004G118300--Sobic007G225050 Sobic004G118300--Sobic009G176100 Sobic008G170800 Sobic008G170800 Sobic001G090700--Sobic008G170800 Sobic001G454600 Sobic001G454600 Sobic001G090700--Sobic001G454600 Sobic010G042300 Sobic010G042300 Sobic001G090700--Sobic010G042300 Sobic001G038700 Sobic001G038700 Sobic001G090700--Sobic001G038700 Sobic006G279100 Sobic006G279100 Sobic001G090700--Sobic006G279100 Sobic009G026600 Sobic009G026600 Sobic001G090700--Sobic009G026600 Sobic001G460900 Sobic001G460900 Sobic001G090700--Sobic001G460900 Sobic010G012200 Sobic010G012200 Sobic001G090700--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic001G090700--Sobic008G190600 Sobic010G274700--Sobic003G329300 Sobic010G274700--Sobic007G174500 Sobic002G375500 Sobic002G375500 Sobic010G274700--Sobic002G375500 Sobic006G248450 Sobic006G248450 Sobic010G274700--Sobic006G248450 Sobic006G145300 Sobic006G145300 Sobic010G274700--Sobic006G145300 Sobic010G142501 Sobic010G142501 Sobic010G274700--Sobic010G142501 Sobic001G431600 Sobic001G431600 Sobic010G274700--Sobic001G431600 Sobic007G175100 Sobic007G175100 Sobic010G274700--Sobic007G175100 Sobic001G229850 Sobic001G229850 Sobic010G274700--Sobic001G229850 Sobic009G137401--Sobic001G191500 Sobic001G190900 Sobic001G190900 Sobic009G137401--Sobic001G190900 Sobic003G053750 Sobic003G053750 Sobic009G137401--Sobic003G053750 Sobic009G137401--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic009G137401--Sobic003G429600 Sobic009G137401--Sobic008G113200 Sobic001G528900 Sobic001G528900 Sobic009G137401--Sobic001G528900 Sobic008G083100 Sobic008G083100 Sobic009G137401--Sobic008G083100 Sobic006G072701 Sobic006G072701 Sobic009G137401--Sobic006G072701
Octagon: transcription factors


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