Gene annotation
Transcriptome id Sobic.007G016200.1
Synonym Sb07g001420, RPS3, RPM1
Functional annotation expressed protein
UniProt C5YM03
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF601
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46730 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g37050.1 : expressed protein
MaizeGDB (Corn) Zm00025a038192 , Zm00025a053871 , Zm00025a055265
Brachypodium KQJ87775 , PNT63251 , KQJ86646 , KQJ87788 , KQJ87782 , KQJ87785 , KQJ87786 , KQJ85613 , KQJ85614
Barley HORVU3Hr1G095760.14 , HORVU3Hr1G095760.15 , HORVU3Hr1G095760.16 , HORVU3Hr1G095760.17 , HORVU3Hr1G095760.18 , HORVU3Hr1G095760.19 , HORVU7Hr1G013300.2 , HORVU7Hr1G013300.3 , HORVU3Hr1G095760.21 , HORVU3Hr1G095760.20 , HORVU3Hr1G109610.1
Wheat TraesCS3D02G430800 , TraesCS3D02G431000 , TraesCS3D02G431000 , TraesCS3A02G438500 , TraesCS7A02G070700 , TraesCS3A02G438600 , TraesCS3B02G472400 , TraesCS4A02G419100 , TraesCS7D02G066300 , TraesCS7D02G066100 , TraesCS3A02G438400 , TraesCS7A02G070800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G226200 - -
2 Sobic.003G267600 potassium channel protein, putative, expressed -
3 Sobic.005G182100 Leucine Rich Repeat family protein, expressed -
4 Sobic.007G078900 - -
5 Sobic.001G245100 - -
6 Sobic.001G191500 expressed protein -
7 Sobic.007G137100 - -
8 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
9 Sobic.010G054150 - -
10 Sobic.004G205900 - -
11 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.004G255550 - -
13 Sobic.008G113200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.002G142350 - -
15 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
16 Sobic.004G118300 OsFBD15 - F-box and FBD domain containing protein, expressed -
17 Sobic.006G215650 - -
18 Sobic.007G046600 - -
19 Sobic.009G192400 - -
20 Sobic.006G021100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate peroxidase (Os)(PubMedID : 27208977)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase


Gene co-expression network
sample Sobic007G016200 Sobic007G016200 Sobic002G226200 Sobic002G226200 Sobic007G016200--Sobic002G226200 Sobic003G267600 Sobic003G267600 Sobic007G016200--Sobic003G267600 Sobic005G182100 Sobic005G182100 Sobic007G016200--Sobic005G182100 Sobic007G078900 Sobic007G078900 Sobic007G016200--Sobic007G078900 Sobic001G245100 Sobic001G245100 Sobic007G016200--Sobic001G245100 Sobic001G191500 Sobic001G191500 Sobic007G016200--Sobic001G191500 Sobic007G137100 Sobic007G137100 Sobic007G016200--Sobic007G137100 Sobic009G252500 Sobic009G252500 Sobic007G016200--Sobic009G252500 Sobic010G054150 Sobic010G054150 Sobic007G016200--Sobic010G054150 Sobic004G255550 Sobic004G255550 Sobic002G226200--Sobic004G255550 Sobic003G219300 Sobic003G219300 Sobic002G226200--Sobic003G219300 Sobic008G083100 Sobic008G083100 Sobic002G226200--Sobic008G083100 Sobic002G226200--Sobic003G267600 Sobic006G041200 Sobic006G041200 Sobic002G226200--Sobic006G041200 Sobic008G190600 Sobic008G190600 Sobic002G226200--Sobic008G190600 Sobic002G226200--Sobic001G191500 Sobic002G226200--Sobic007G016200 Sobic006G021100 Sobic006G021100 Sobic002G226200--Sobic006G021100 Sobic004G205900 Sobic004G205900 Sobic003G267600--Sobic004G205900 Sobic009G192400 Sobic009G192400 Sobic003G267600--Sobic009G192400 Sobic003G267600--Sobic002G226200 Sobic001G283400 Sobic001G283400 Sobic003G267600--Sobic001G283400 Sobic003G267600--Sobic007G016200 Sobic007G206400 Sobic007G206400 Sobic003G267600--Sobic007G206400 Sobic003G267600--Sobic007G078900 Sobic010G155000 Sobic010G155000 Sobic003G267600--Sobic010G155000 Sobic009G199750 Sobic009G199750 Sobic003G267600--Sobic009G199750 Sobic005G182100--Sobic007G137100 Sobic003G329300 Sobic003G329300 Sobic005G182100--Sobic003G329300 Sobic005G182100--Sobic007G016200 Sobic004G203633 Sobic004G203633 Sobic005G182100--Sobic004G203633 Sobic002G033200 Sobic002G033200 Sobic005G182100--Sobic002G033200 Sobic004G118300 Sobic004G118300 Sobic005G182100--Sobic004G118300 Sobic001G090700 Sobic001G090700 Sobic005G182100--Sobic001G090700 Sobic010G274700 Sobic010G274700 Sobic005G182100--Sobic010G274700 Sobic009G137401 Sobic009G137401 Sobic005G182100--Sobic009G137401 Sobic003G135900 Sobic003G135900 Sobic007G078900--Sobic003G135900 Sobic007G078900--Sobic003G267600 Sobic007G078900--Sobic004G255550 Sobic002G342700 Sobic002G342700 Sobic007G078900--Sobic002G342700 Sobic007G078900--Sobic006G041200 Sobic007G078900--Sobic002G226200 Sobic007G078900--Sobic007G016200 Sobic007G078900--Sobic006G021100 Sobic004G030850 Sobic004G030850 Sobic007G078900--Sobic004G030850 Sobic007G052000 Sobic007G052000 Sobic001G245100--Sobic007G052000 Sobic006G157450 Sobic006G157450 Sobic001G245100--Sobic006G157450 Sobic003G399800 Sobic003G399800 Sobic001G245100--Sobic003G399800 Sobic004G237900 Sobic004G237900 Sobic001G245100--Sobic004G237900 Sobic005G228650 Sobic005G228650 Sobic001G245100--Sobic005G228650 Sobic001G245100--Sobic008G190600 Sobic006G213350 Sobic006G213350 Sobic001G245100--Sobic006G213350 Sobic008G170800 Sobic008G170800 Sobic001G245100--Sobic008G170800 Sobic001G483001 Sobic001G483001 Sobic001G245100--Sobic001G483001 Sobic001G191500--Sobic008G190600 Sobic008G142200 Sobic008G142200 Sobic001G191500--Sobic008G142200 Sobic001G191500--Sobic009G137401 Sobic001G191500--Sobic006G157450 Sobic006G072701 Sobic006G072701 Sobic001G191500--Sobic006G072701 Sobic001G190900 Sobic001G190900 Sobic001G191500--Sobic001G190900 Sobic001G191500--Sobic008G083100 Sobic004G033650 Sobic004G033650 Sobic001G191500--Sobic004G033650 Sobic009G074800 Sobic009G074800 Sobic001G191500--Sobic009G074800 Sobic007G137100--Sobic003G329300 Sobic007G137100--Sobic005G182100 Sobic008G085800 Sobic008G085800 Sobic007G137100--Sobic008G085800 Sobic002G171901 Sobic002G171901 Sobic007G137100--Sobic002G171901 Sobic003G358150 Sobic003G358150 Sobic007G137100--Sobic003G358150 Sobic007G174500 Sobic007G174500 Sobic007G137100--Sobic007G174500 Sobic003G399200 Sobic003G399200 Sobic007G137100--Sobic003G399200 Sobic003G335000 Sobic003G335000 Sobic007G137100--Sobic003G335000 Sobic007G137100--Sobic004G118300 Sobic007G046600 Sobic007G046600 Sobic009G252500--Sobic007G046600 Sobic003G298000 Sobic003G298000 Sobic009G252500--Sobic003G298000 Sobic002G209450 Sobic002G209450 Sobic009G252500--Sobic002G209450 Sobic003G241600 Sobic003G241600 Sobic009G252500--Sobic003G241600 Sobic004G190800 Sobic004G190800 Sobic009G252500--Sobic004G190800 Sobic009G049100 Sobic009G049100 Sobic009G252500--Sobic009G049100 Sobic010G261500 Sobic010G261500 Sobic009G252500--Sobic010G261500 Sobic001G494400 Sobic001G494400 Sobic009G252500--Sobic001G494400 Sobic009G252500--Sobic008G170800 Sobic006G248450 Sobic006G248450 Sobic010G054150--Sobic006G248450 Sobic010G054150--Sobic007G052000 Sobic004G070150 Sobic004G070150 Sobic010G054150--Sobic004G070150 Sobic010G054150--Sobic010G274700 Sobic010G054150--Sobic002G226200 Sobic010G054150--Sobic007G016200 Sobic007G137750 Sobic007G137750 Sobic010G054150--Sobic007G137750 Sobic010G054150--Sobic005G182100 Sobic002G208500 Sobic002G208500 Sobic010G054150--Sobic002G208500
Octagon: transcription factors


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