Gene annotation
Transcriptome id Sobic.006G021100.1
Synonym Sb06g001970, APX3,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
L-ascorbate peroxidase (Os) (PubMedID : 27208977)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed
UniProt A0A1Z5RCK3
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF8
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G35000 : ascorbate peroxidase 3
RAP-DB (Rice) LOC_Os04g14680.1 : OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed
MaizeGDB (Corn) Zm00025a055661
Brachypodium KQJ81878 , KQJ81879
Barley -
Wheat TraesCS2A02G071700 , TraesCS2B02G087400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G336550 - -
2 Sobic.006G041200 - -
3 Sobic.007G089566 - -
4 Sobic.003G219300 leaf senescence related protein, putative, expressed -
5 Sobic.007G203800 - -
6 Sobic.002G226200 - -
7 Sobic.004G030850 - -
8 Sobic.006G111000 expressed protein -
9 Sobic.004G084600 similar to Putative uncharacterized protein(PubMedID : 29862293)@AP2 domain containing protein, expressed -
10 Sobic.001G191500 expressed protein -
11 Sobic.002G171901 - -
12 Sobic.004G255550 - -
13 Sobic.006G072701 - -
14 Sobic.003G053750 - -
15 Sobic.001G283400 CSLD1 - cellulose synthase-like family D, expressed -
16 Sobic.002G413700 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
17 Sobic.009G176100 - -
18 Sobic.006G215650 - -
19 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
20 Sobic.002G129900 - -


Gene co-expression network
sample Sobic006G021100 Sobic006G021100 Sobic003G336550 Sobic003G336550 Sobic006G021100--Sobic003G336550 Sobic006G041200 Sobic006G041200 Sobic006G021100--Sobic006G041200 Sobic007G089566 Sobic007G089566 Sobic006G021100--Sobic007G089566 Sobic003G219300 Sobic003G219300 Sobic006G021100--Sobic003G219300 Sobic007G203800 Sobic007G203800 Sobic006G021100--Sobic007G203800 Sobic002G226200 Sobic002G226200 Sobic006G021100--Sobic002G226200 Sobic004G030850 Sobic004G030850 Sobic006G021100--Sobic004G030850 Sobic006G111000 Sobic006G111000 Sobic006G021100--Sobic006G111000 Sobic004G084600 Sobic004G084600 Sobic006G021100--Sobic004G084600 Sobic003G336550--Sobic004G030850 Sobic003G336550--Sobic006G041200 Sobic003G336550--Sobic006G021100 Sobic003G336550--Sobic004G084600 Sobic003G336550--Sobic006G111000 Sobic004G255550 Sobic004G255550 Sobic003G336550--Sobic004G255550 Sobic001G485901 Sobic001G485901 Sobic003G336550--Sobic001G485901 Sobic003G336550--Sobic007G203800 Sobic008G113200 Sobic008G113200 Sobic003G336550--Sobic008G113200 Sobic006G041200--Sobic006G111000 Sobic006G041200--Sobic004G255550 Sobic007G182300 Sobic007G182300 Sobic006G041200--Sobic007G182300 Sobic006G041200--Sobic003G336550 Sobic006G041200--Sobic004G084600 Sobic006G041200--Sobic003G219300 Sobic002G171901 Sobic002G171901 Sobic006G041200--Sobic002G171901 Sobic002G200400 Sobic002G200400 Sobic006G041200--Sobic002G200400 Sobic004G180950 Sobic004G180950 Sobic006G041200--Sobic004G180950 Sobic007G089566--Sobic006G021100 Sobic002G413700 Sobic002G413700 Sobic007G089566--Sobic002G413700 Sobic001G191500 Sobic001G191500 Sobic007G089566--Sobic001G191500 Sobic007G089566--Sobic007G203800 Sobic002G209450 Sobic002G209450 Sobic007G089566--Sobic002G209450 Sobic004G205900 Sobic004G205900 Sobic007G089566--Sobic004G205900 Sobic007G089566--Sobic003G336550 Sobic004G118000 Sobic004G118000 Sobic007G089566--Sobic004G118000 Sobic007G089566--Sobic004G084600 Sobic003G272000 Sobic003G272000 Sobic003G219300--Sobic003G272000 Sobic003G219300--Sobic006G041200 Sobic008G132500 Sobic008G132500 Sobic003G219300--Sobic008G132500 Sobic001G250750 Sobic001G250750 Sobic003G219300--Sobic001G250750 Sobic003G219300--Sobic007G182300 Sobic003G219300--Sobic002G200400 Sobic003G219300--Sobic002G226200 Sobic010G235100 Sobic010G235100 Sobic003G219300--Sobic010G235100 Sobic006G072701 Sobic006G072701 Sobic003G219300--Sobic006G072701 Sobic007G203800--Sobic002G171901 Sobic007G203800--Sobic004G084600 Sobic009G192400 Sobic009G192400 Sobic007G203800--Sobic009G192400 Sobic007G203800--Sobic006G041200 Sobic007G225050 Sobic007G225050 Sobic007G203800--Sobic007G225050 Sobic007G206400 Sobic007G206400 Sobic007G203800--Sobic007G206400 Sobic007G203800--Sobic003G336550 Sobic007G203800--Sobic006G021100 Sobic008G085800 Sobic008G085800 Sobic007G203800--Sobic008G085800 Sobic002G226200--Sobic004G255550 Sobic002G226200--Sobic003G219300 Sobic008G083100 Sobic008G083100 Sobic002G226200--Sobic008G083100 Sobic003G267600 Sobic003G267600 Sobic002G226200--Sobic003G267600 Sobic002G226200--Sobic006G041200 Sobic008G190600 Sobic008G190600 Sobic002G226200--Sobic008G190600 Sobic002G226200--Sobic001G191500 Sobic007G016200 Sobic007G016200 Sobic002G226200--Sobic007G016200 Sobic002G226200--Sobic006G021100 Sobic004G030850--Sobic003G336550 Sobic004G030850--Sobic004G084600 Sobic010G088100 Sobic010G088100 Sobic004G030850--Sobic010G088100 Sobic004G030850--Sobic008G113200 Sobic004G030850--Sobic006G072701 Sobic004G030850--Sobic004G255550 Sobic004G030850--Sobic002G171901 Sobic003G053750 Sobic003G053750 Sobic004G030850--Sobic003G053750 Sobic004G030850--Sobic006G041200 Sobic006G111000--Sobic006G041200 Sobic008G100900 Sobic008G100900 Sobic006G111000--Sobic008G100900 Sobic006G111000--Sobic007G182300 Sobic004G117850 Sobic004G117850 Sobic006G111000--Sobic004G117850 Sobic006G111000--Sobic004G084600 Sobic006G111000--Sobic004G255550 Sobic006G111000--Sobic002G171901 Sobic006G111000--Sobic003G336550 Sobic009G176100 Sobic009G176100 Sobic006G111000--Sobic009G176100 Sobic004G084600--Sobic002G171901 Sobic004G084600--Sobic006G072701 Sobic004G084600--Sobic004G030850 Sobic004G084600--Sobic006G041200 Sobic004G084600--Sobic006G111000 Sobic004G084600--Sobic003G336550 Sobic004G084600--Sobic007G203800 Sobic004G084600--Sobic010G088100 Sobic004G084600--Sobic004G117850
Octagon: transcription factors


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