Gene annotation
Transcriptome id Sobic.003G219300.1
Synonym TBR, Sb03g027810
Functional annotation leaf senescence related protein, putative, expressed
UniProt C5XR07
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06700 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os01g42810.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a038494
Brachypodium KQJ83485 , KQK08715 , KQK08717 , KQK08716
Barley HORVU2Hr1G087890.2 , HORVU2Hr1G087890.3 , HORVU2Hr1G087890.1 , HORVU2Hr1G087890.4
Wheat TraesCS2D02G360400 , TraesCS2B02G381000 , TraesCS2A02G363100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G272000 expressed protein -
2 Sobic.006G041200 - -
3 Sobic.008G132500 pleiotropic drug resistance protein 15, putative, expressed -
4 Sobic.001G250750 - -
5 Sobic.007G182300 Plant PDR ABC transporter associated domain containing protein, expressed -
6 Sobic.002G200400 Leucine Rich Repeat family protein, expressed -
7 Sobic.002G226200 - -
8 Sobic.010G235100 leucine rich repeat protein, putative, expressed -
9 Sobic.006G072701 - -
10 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
11 Sobic.004G180950 - -
12 Sobic.006G021100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate peroxidase (Os)(PubMedID : 27208977)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
13 Sobic.005G118800 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.001G352633 - -
15 Sobic.009G074800 - -
16 Sobic.001G283400 CSLD1 - cellulose synthase-like family D, expressed -
17 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.006G111000 expressed protein -
19 Sobic.009G199750 - -
20 Sobic.004G209100 GRAM domain containing protein, expressed -


Gene co-expression network
sample Sobic003G219300 Sobic003G219300 Sobic003G272000 Sobic003G272000 Sobic003G219300--Sobic003G272000 Sobic006G041200 Sobic006G041200 Sobic003G219300--Sobic006G041200 Sobic008G132500 Sobic008G132500 Sobic003G219300--Sobic008G132500 Sobic001G250750 Sobic001G250750 Sobic003G219300--Sobic001G250750 Sobic007G182300 Sobic007G182300 Sobic003G219300--Sobic007G182300 Sobic002G200400 Sobic002G200400 Sobic003G219300--Sobic002G200400 Sobic002G226200 Sobic002G226200 Sobic003G219300--Sobic002G226200 Sobic010G235100 Sobic010G235100 Sobic003G219300--Sobic010G235100 Sobic006G072701 Sobic006G072701 Sobic003G219300--Sobic006G072701 Sobic003G272000--Sobic003G219300 Sobic003G272000--Sobic007G182300 Sobic009G074800 Sobic009G074800 Sobic003G272000--Sobic009G074800 Sobic003G272000--Sobic001G250750 Sobic004G160750 Sobic004G160750 Sobic003G272000--Sobic004G160750 Sobic006G111000 Sobic006G111000 Sobic003G272000--Sobic006G111000 Sobic001G352633 Sobic001G352633 Sobic003G272000--Sobic001G352633 Sobic004G180950 Sobic004G180950 Sobic003G272000--Sobic004G180950 Sobic003G272000--Sobic008G132500 Sobic006G041200--Sobic006G111000 Sobic004G255550 Sobic004G255550 Sobic006G041200--Sobic004G255550 Sobic006G041200--Sobic007G182300 Sobic003G336550 Sobic003G336550 Sobic006G041200--Sobic003G336550 Sobic004G084600 Sobic004G084600 Sobic006G041200--Sobic004G084600 Sobic006G041200--Sobic003G219300 Sobic002G171901 Sobic002G171901 Sobic006G041200--Sobic002G171901 Sobic006G041200--Sobic002G200400 Sobic006G041200--Sobic004G180950 Sobic002G009000 Sobic002G009000 Sobic008G132500--Sobic002G009000 Sobic008G132500--Sobic001G250750 Sobic004G209100 Sobic004G209100 Sobic008G132500--Sobic004G209100 Sobic008G132500--Sobic010G235100 Sobic005G118800 Sobic005G118800 Sobic008G132500--Sobic005G118800 Sobic003G312900 Sobic003G312900 Sobic008G132500--Sobic003G312900 Sobic008G132500--Sobic003G219300 Sobic003G109150 Sobic003G109150 Sobic008G132500--Sobic003G109150 Sobic003G232600 Sobic003G232600 Sobic008G132500--Sobic003G232600 Sobic001G250750--Sobic010G235100 Sobic001G250750--Sobic002G009000 Sobic001G250750--Sobic008G132500 Sobic001G250750--Sobic007G182300 Sobic001G250750--Sobic003G109150 Sobic001G250750--Sobic003G232600 Sobic001G250750--Sobic003G219300 Sobic002G067900 Sobic002G067900 Sobic001G250750--Sobic002G067900 Sobic005G090800 Sobic005G090800 Sobic001G250750--Sobic005G090800 Sobic007G182300--Sobic001G250750 Sobic007G182300--Sobic006G041200 Sobic003G096950 Sobic003G096950 Sobic007G182300--Sobic003G096950 Sobic007G182300--Sobic006G111000 Sobic007G182300--Sobic001G352633 Sobic007G182300--Sobic003G272000 Sobic009G192400 Sobic009G192400 Sobic007G182300--Sobic009G192400 Sobic007G182300--Sobic003G219300 Sobic007G182300--Sobic006G072701 Sobic002G200400--Sobic004G180950 Sobic001G283400 Sobic001G283400 Sobic002G200400--Sobic001G283400 Sobic009G199750 Sobic009G199750 Sobic002G200400--Sobic009G199750 Sobic010G155000 Sobic010G155000 Sobic002G200400--Sobic010G155000 Sobic004G072300 Sobic004G072300 Sobic002G200400--Sobic004G072300 Sobic006G205300 Sobic006G205300 Sobic002G200400--Sobic006G205300 Sobic004G183701 Sobic004G183701 Sobic002G200400--Sobic004G183701 Sobic003G085533 Sobic003G085533 Sobic002G200400--Sobic003G085533 Sobic002G200400--Sobic001G352633 Sobic002G226200--Sobic004G255550 Sobic002G226200--Sobic003G219300 Sobic008G083100 Sobic008G083100 Sobic002G226200--Sobic008G083100 Sobic003G267600 Sobic003G267600 Sobic002G226200--Sobic003G267600 Sobic002G226200--Sobic006G041200 Sobic008G190600 Sobic008G190600 Sobic002G226200--Sobic008G190600 Sobic001G191500 Sobic001G191500 Sobic002G226200--Sobic001G191500 Sobic007G016200 Sobic007G016200 Sobic002G226200--Sobic007G016200 Sobic006G021100 Sobic006G021100 Sobic002G226200--Sobic006G021100 Sobic010G235100--Sobic001G250750 Sobic010G235100--Sobic008G132500 Sobic010G235100--Sobic003G232600 Sobic010G235100--Sobic002G009000 Sobic010G235100--Sobic002G067900 Sobic010G235100--Sobic005G118800 Sobic010G235100--Sobic004G072300 Sobic002G074900 Sobic002G074900 Sobic010G235100--Sobic002G074900 Sobic010G235100--Sobic005G090800 Sobic006G072701--Sobic008G083100 Sobic006G072701--Sobic004G084600 Sobic006G072701--Sobic001G191500 Sobic009G026700 Sobic009G026700 Sobic006G072701--Sobic009G026700 Sobic006G072701--Sobic002G171901 Sobic006G072701--Sobic007G182300 Sobic006G072701--Sobic006G041200 Sobic006G072701--Sobic009G074800 Sobic006G072701--Sobic001G250750
Octagon: transcription factors


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