Gene annotation
Transcriptome id Sobic.004G209100.2,Sobic.004G209100.3
Synonym Sb04g025470
Functional annotation GRAM domain containing protein, expressed
UniProt A0A1Z5RND9 , A0A1Z5RNZ2
Pfam PF00168 PF02893 PF16016
Panther DB PTHR23319 PTHR23319:SF16
NCBI CDD KOG1032; Uncharacterized conserved protein, contains GRAM domain
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G59660 : C2 domain-containing protein / GRAM domain-containing protein
RAP-DB (Rice) LOC_Os02g39280.1,LOC_Os09g34130.1 : GRAM domain containing protein, expressed,C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a021243
Brachypodium PNT69014 , PNT69015 , PNT69016 , PNT69017 , PNT69010 , PNT69011 , PNT69012 , PNT69013 , PNT69018 , PNT69019 , PNT69007 , PNT69006 , PNT69005 , PNT69004 , PNT69003 , PNT69002 , PNT69001 , PNT69000 , PNT69009 , PNT69008 , PNT69021 , PNT69020 , PNT69023 , PNT69022 , PNT68999
Barley HORVU6Hr1G055560.5 , HORVU6Hr1G055560.7 , HORVU6Hr1G055560.6 , HORVU6Hr1G055560.1 , HORVU6Hr1G055560.9
Wheat TraesCS6D02G199900 , TraesCS6A02G217600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G132500 pleiotropic drug resistance protein 15, putative, expressed -
2 Sobic.003G312900 - -
3 Sobic.005G118800 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.005G180850 - -
5 Sobic.006G145300 Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed -
6 Sobic.010G235100 leucine rich repeat protein, putative, expressed -
7 Sobic.003G232600 polygalacturonase, putative, expressed -
8 Sobic.003G312800 - -
9 Sobic.005G090800 PHD-finger domain containing protein, putative, expressed -
10 Sobic.001G250750 - -
11 Sobic.002G009000 - -
12 Sobic.001G226401 - K06995: uncharacterized protein
13 Sobic.003G219300 leaf senescence related protein, putative, expressed -
14 Sobic.002G398300 expressed protein -
15 Sobic.001G229850 - -
16 Sobic.002G212900 expressed protein -
17 Sobic.002G297100 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
18 Sobic.010G136700 - -
19 Sobic.001G190900 ABCG protein(PubMedID : 21265893)@"Orthologous gene of wheat Lr34 gene, expressed in accession AusTRCF 302546, but not expreesed in BTx623 possibly due to transposon insertions in intron 4"(PubMedID : 23117720)@pleiotropic drug resistance protein 15, putative, expressed -
20 Sobic.001G497400 - -


Gene co-expression network
sample Sobic004G209100 Sobic004G209100 Sobic008G132500 Sobic008G132500 Sobic004G209100--Sobic008G132500 Sobic003G312900 Sobic003G312900 Sobic004G209100--Sobic003G312900 Sobic005G118800 Sobic005G118800 Sobic004G209100--Sobic005G118800 Sobic005G180850 Sobic005G180850 Sobic004G209100--Sobic005G180850 Sobic006G145300 Sobic006G145300 Sobic004G209100--Sobic006G145300 Sobic010G235100 Sobic010G235100 Sobic004G209100--Sobic010G235100 Sobic003G232600 Sobic003G232600 Sobic004G209100--Sobic003G232600 Sobic003G312800 Sobic003G312800 Sobic004G209100--Sobic003G312800 Sobic005G090800 Sobic005G090800 Sobic004G209100--Sobic005G090800 Sobic002G009000 Sobic002G009000 Sobic008G132500--Sobic002G009000 Sobic001G250750 Sobic001G250750 Sobic008G132500--Sobic001G250750 Sobic008G132500--Sobic004G209100 Sobic008G132500--Sobic010G235100 Sobic008G132500--Sobic005G118800 Sobic008G132500--Sobic003G312900 Sobic003G219300 Sobic003G219300 Sobic008G132500--Sobic003G219300 Sobic003G109150 Sobic003G109150 Sobic008G132500--Sobic003G109150 Sobic008G132500--Sobic003G232600 Sobic003G312900--Sobic003G312800 Sobic003G312900--Sobic004G209100 Sobic001G229850 Sobic001G229850 Sobic003G312900--Sobic001G229850 Sobic003G312900--Sobic005G180850 Sobic001G190900 Sobic001G190900 Sobic003G312900--Sobic001G190900 Sobic003G312900--Sobic008G132500 Sobic001G226401 Sobic001G226401 Sobic003G312900--Sobic001G226401 Sobic003G312900--Sobic005G118800 Sobic003G312900--Sobic003G232600 Sobic005G118800--Sobic008G132500 Sobic005G118800--Sobic004G209100 Sobic005G118800--Sobic010G235100 Sobic005G118800--Sobic002G009000 Sobic005G118800--Sobic001G250750 Sobic005G118800--Sobic003G312900 Sobic005G118800--Sobic003G219300 Sobic006G072701 Sobic006G072701 Sobic005G118800--Sobic006G072701 Sobic005G118800--Sobic003G232600 Sobic005G180850--Sobic003G312900 Sobic005G180850--Sobic004G209100 Sobic005G180850--Sobic010G235100 Sobic001G373850 Sobic001G373850 Sobic005G180850--Sobic001G373850 Sobic005G180850--Sobic008G132500 Sobic002G074900 Sobic002G074900 Sobic005G180850--Sobic002G074900 Sobic006G265500 Sobic006G265500 Sobic005G180850--Sobic006G265500 Sobic005G180850--Sobic003G312800 Sobic005G180850--Sobic001G226401 Sobic006G145300--Sobic004G209100 Sobic006G223101 Sobic006G223101 Sobic006G145300--Sobic006G223101 Sobic008G115200 Sobic008G115200 Sobic006G145300--Sobic008G115200 Sobic006G145300--Sobic005G090800 Sobic003G251000 Sobic003G251000 Sobic006G145300--Sobic003G251000 Sobic006G145300--Sobic010G235100 Sobic007G004400 Sobic007G004400 Sobic006G145300--Sobic007G004400 Sobic010G136700 Sobic010G136700 Sobic006G145300--Sobic010G136700 Sobic006G145300--Sobic003G232600 Sobic010G235100--Sobic001G250750 Sobic010G235100--Sobic008G132500 Sobic010G235100--Sobic003G232600 Sobic010G235100--Sobic002G009000 Sobic002G067900 Sobic002G067900 Sobic010G235100--Sobic002G067900 Sobic010G235100--Sobic005G118800 Sobic004G072300 Sobic004G072300 Sobic010G235100--Sobic004G072300 Sobic010G235100--Sobic002G074900 Sobic010G235100--Sobic005G090800 Sobic003G232600--Sobic010G235100 Sobic003G232600--Sobic002G067900 Sobic003G232600--Sobic001G250750 Sobic003G232600--Sobic005G090800 Sobic003G232600--Sobic008G132500 Sobic003G232600--Sobic002G009000 Sobic003G232600--Sobic004G209100 Sobic003G232600--Sobic003G312900 Sobic003G232600--Sobic010G136700 Sobic003G312800--Sobic003G312900 Sobic002G398300 Sobic002G398300 Sobic003G312800--Sobic002G398300 Sobic005G068000 Sobic005G068000 Sobic003G312800--Sobic005G068000 Sobic003G312800--Sobic001G190900 Sobic003G312600 Sobic003G312600 Sobic003G312800--Sobic003G312600 Sobic003G312800--Sobic004G209100 Sobic001G239000 Sobic001G239000 Sobic003G312800--Sobic001G239000 Sobic003G312800--Sobic005G180850 Sobic005G027350 Sobic005G027350 Sobic003G312800--Sobic005G027350 Sobic005G090800--Sobic001G226401 Sobic005G090800--Sobic002G067900 Sobic001G016050 Sobic001G016050 Sobic005G090800--Sobic001G016050 Sobic005G090800--Sobic010G136700 Sobic005G090800--Sobic010G235100 Sobic005G090800--Sobic001G250750 Sobic005G090800--Sobic003G232600 Sobic005G090800--Sobic008G115200 Sobic005G090800--Sobic002G074900
Octagon: transcription factors


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