Gene annotation
Transcriptome id Sobic.008G132500.2
Synonym
Functional annotation pleiotropic drug resistance protein 15, putative, expressed
UniProt A0A1Z5R7B9
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF287
NCBI CDD KOG0065; Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G29940 : pleiotropic drug resistance 3
RAP-DB (Rice) LOC_Os01g42380.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G009000 - -
2 Sobic.001G250750 - -
3 Sobic.004G209100 GRAM domain containing protein, expressed -
4 Sobic.010G235100 leucine rich repeat protein, putative, expressed -
5 Sobic.005G118800 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.003G312900 - -
7 Sobic.003G219300 leaf senescence related protein, putative, expressed -
8 Sobic.003G109150 - -
9 Sobic.003G232600 polygalacturonase, putative, expressed -
10 Sobic.005G090800 PHD-finger domain containing protein, putative, expressed -
11 Sobic.007G141900 resistance protein SlVe1 precursor, putative, expressed -
12 Sobic.001G226401 - K06995: uncharacterized protein
13 Sobic.006G072701 - -
14 Sobic.009G210250 - -
15 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
16 Sobic.007G182300 Plant PDR ABC transporter associated domain containing protein, expressed -
17 Sobic.005G180850 - -
18 Sobic.003G023450 - -
19 Sobic.002G074900 receptor kinase, putative, expressed -
20 Sobic.003G272000 expressed protein -


Gene co-expression network
sample Sobic008G132500 Sobic008G132500 Sobic002G009000 Sobic002G009000 Sobic008G132500--Sobic002G009000 Sobic001G250750 Sobic001G250750 Sobic008G132500--Sobic001G250750 Sobic004G209100 Sobic004G209100 Sobic008G132500--Sobic004G209100 Sobic010G235100 Sobic010G235100 Sobic008G132500--Sobic010G235100 Sobic005G118800 Sobic005G118800 Sobic008G132500--Sobic005G118800 Sobic003G312900 Sobic003G312900 Sobic008G132500--Sobic003G312900 Sobic003G219300 Sobic003G219300 Sobic008G132500--Sobic003G219300 Sobic003G109150 Sobic003G109150 Sobic008G132500--Sobic003G109150 Sobic003G232600 Sobic003G232600 Sobic008G132500--Sobic003G232600 Sobic002G009000--Sobic001G250750 Sobic002G009000--Sobic008G132500 Sobic002G009000--Sobic010G235100 Sobic009G210250 Sobic009G210250 Sobic002G009000--Sobic009G210250 Sobic002G074900 Sobic002G074900 Sobic002G009000--Sobic002G074900 Sobic007G141900 Sobic007G141900 Sobic002G009000--Sobic007G141900 Sobic002G009000--Sobic005G118800 Sobic002G067900 Sobic002G067900 Sobic002G009000--Sobic002G067900 Sobic002G009000--Sobic003G109150 Sobic001G250750--Sobic010G235100 Sobic001G250750--Sobic002G009000 Sobic001G250750--Sobic008G132500 Sobic007G182300 Sobic007G182300 Sobic001G250750--Sobic007G182300 Sobic001G250750--Sobic003G109150 Sobic001G250750--Sobic003G232600 Sobic001G250750--Sobic003G219300 Sobic001G250750--Sobic002G067900 Sobic005G090800 Sobic005G090800 Sobic001G250750--Sobic005G090800 Sobic004G209100--Sobic008G132500 Sobic004G209100--Sobic003G312900 Sobic004G209100--Sobic005G118800 Sobic005G180850 Sobic005G180850 Sobic004G209100--Sobic005G180850 Sobic006G145300 Sobic006G145300 Sobic004G209100--Sobic006G145300 Sobic004G209100--Sobic010G235100 Sobic004G209100--Sobic003G232600 Sobic003G312800 Sobic003G312800 Sobic004G209100--Sobic003G312800 Sobic004G209100--Sobic005G090800 Sobic010G235100--Sobic001G250750 Sobic010G235100--Sobic008G132500 Sobic010G235100--Sobic003G232600 Sobic010G235100--Sobic002G009000 Sobic010G235100--Sobic002G067900 Sobic010G235100--Sobic005G118800 Sobic004G072300 Sobic004G072300 Sobic010G235100--Sobic004G072300 Sobic010G235100--Sobic002G074900 Sobic010G235100--Sobic005G090800 Sobic005G118800--Sobic008G132500 Sobic005G118800--Sobic004G209100 Sobic005G118800--Sobic010G235100 Sobic005G118800--Sobic002G009000 Sobic005G118800--Sobic001G250750 Sobic005G118800--Sobic003G312900 Sobic005G118800--Sobic003G219300 Sobic006G072701 Sobic006G072701 Sobic005G118800--Sobic006G072701 Sobic005G118800--Sobic003G232600 Sobic003G312900--Sobic003G312800 Sobic003G312900--Sobic004G209100 Sobic001G229850 Sobic001G229850 Sobic003G312900--Sobic001G229850 Sobic003G312900--Sobic005G180850 Sobic001G190900 Sobic001G190900 Sobic003G312900--Sobic001G190900 Sobic003G312900--Sobic008G132500 Sobic001G226401 Sobic001G226401 Sobic003G312900--Sobic001G226401 Sobic003G312900--Sobic005G118800 Sobic003G312900--Sobic003G232600 Sobic003G272000 Sobic003G272000 Sobic003G219300--Sobic003G272000 Sobic006G041200 Sobic006G041200 Sobic003G219300--Sobic006G041200 Sobic003G219300--Sobic008G132500 Sobic003G219300--Sobic001G250750 Sobic003G219300--Sobic007G182300 Sobic002G200400 Sobic002G200400 Sobic003G219300--Sobic002G200400 Sobic002G226200 Sobic002G226200 Sobic003G219300--Sobic002G226200 Sobic003G219300--Sobic010G235100 Sobic003G219300--Sobic006G072701 Sobic004G223800 Sobic004G223800 Sobic003G109150--Sobic004G223800 Sobic003G109150--Sobic001G250750 Sobic003G109150--Sobic010G235100 Sobic003G109150--Sobic002G009000 Sobic003G109150--Sobic008G132500 Sobic010G169950 Sobic010G169950 Sobic003G109150--Sobic010G169950 Sobic003G109150--Sobic002G074900 Sobic001G340100 Sobic001G340100 Sobic003G109150--Sobic001G340100 Sobic006G111000 Sobic006G111000 Sobic003G109150--Sobic006G111000 Sobic003G232600--Sobic010G235100 Sobic003G232600--Sobic002G067900 Sobic003G232600--Sobic001G250750 Sobic003G232600--Sobic005G090800 Sobic003G232600--Sobic008G132500 Sobic003G232600--Sobic002G009000 Sobic003G232600--Sobic004G209100 Sobic003G232600--Sobic003G312900 Sobic010G136700 Sobic010G136700 Sobic003G232600--Sobic010G136700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.